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Record W4413826251 · doi:10.1093/gigascience/giaf094

Comparing linear and nonlinear finite element models of vertebral strength across the thoracolumbar spine: a benchmark from density-calibrated computed tomography

2025· article· en· W4413826251 on OpenAlexafffund
Matthias Walle, Bryn E. Matheson, Steven K. Boyd

Bibliographic record

VenueGigaScience · 2025
Typearticle
Languageen
FieldMedicine
TopicBone health and osteoporosis research
Canadian institutionsAlberta Bone and Joint Health InstituteUniversity of Calgary
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsCalibrationQuantitative computed tomographyComputer scienceNonlinear systemBenchmark (surveying)Finite element methodTomographyJackknife resamplingRadiologyMathematicsStatisticsBone densityMedicineStructural engineeringPhysicsOsteoporosisEstimatorGeologyEngineering

Abstract

fetched live from OpenAlex

BACKGROUND: Opportunistic assessment of vertebral strength from clinical computed tomography (CT) scans holds substantial promise for fracture risk stratification, yet variability in calibration methods and finite element (FE) modeling approaches has led to limited comparability across studies. In this work, we provide a publicly available benchmark dataset that supports standardized biomechanical analysis of the thoracic and lumbar spine using density-calibrated CT data. We extended the VerSe 2019 dataset to include phantomless quantitative CT calibration, automated vertebral substructure segmentation, and vertebral strength estimates derived from both linear and nonlinear FE models. The cohort comprises 141 patients scanned across 5 CT systems, including contrast-enhanced protocols. RESULTS: Phantomless calibration was performed using automatically segmented tissue references and validated against synchronous calibration phantoms in 17 scans. To evaluate model performance, we implemented a nonlinear elastoplastic FE model and compared it to 2 linear estimates. A displacement-calibrated linear model (0.2% axial strain) demonstrated excellent agreement with nonlinear failure loads (R = 0.96; mean difference = -0.07 kN), while a stiffness-based approach showed similarly strong correlation (R = 0.92). We evaluated vertebral strength at all thoracic and lumbar levels, enabling level-wise normalization and comparison. Strength ratios revealed consistent anatomical trends and identified T12 and T9 as reliable alternatives to L1 for opportunistic screening and model standardization. CONCLUSIONS: All calibrated scans, segmentations, software, and modeling outputs are publicly released, providing a benchmark resource for validation and development of FE models, radiomics tools, and other quantitative imaging applications in musculoskeletal research.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.636
Threshold uncertainty score0.447

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.028
GPT teacher head0.330
Teacher spread0.301 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes2
Has abstractyes

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