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Record W4413834052 · doi:10.7717/peerj-cs.3095

The DBCV index is more informative than DCSI, CDbw, and VIASCKDE indices for unsupervised clustering internal assessment of concave-shaped and density-based clusters

2025· article· en· W4413834052 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenuePeerJ Computer Science · 2025
Typearticle
Languageen
FieldDecision Sciences
TopicScientific Computing and Data Management
Canadian institutionsUniversity of Toronto
Fundersnot available
KeywordsCluster analysisIndex (typography)Pattern recognition (psychology)Cluster (spacecraft)Artificial intelligenceStatisticsComputer scienceMathematicsData mining

Abstract

fetched live from OpenAlex

, according to specific criteria defined by the clustering algorithm employed. Since clustering methods are unsupervised, no ground truth or gold standard information is available to assess its results, making it challenging to know the results obtained are good or not. In this context, several clustering internal rates are available, like Silhouette coefficient, Calinski-Harabasz index, Davies-Bouldin, Dunn index, Gap statistic, and Shannon entropy, just to mention a few. Even if popular, these clustering internal scores work well only when used to assess convex-shaped and well-separated clusters, but they fail when utilized to evaluate concave-shaped and nested clusters. In these concave-shaped and density-based cases, other coefficients can be informative: Density-Based Clustering Validation Index (DBCVI), Compose Density between and within clusters Index (CDbw), Density Cluster Separability Index (DCSI), Validity Index for Arbitrary-Shaped Clusters based on the kernel density estimation (VIASCKDE). In this study, we describe the DBCV index precisely, and compare its outcomes with the outcomes obtained by CDbw, DCSI, and VIASCKDE on several artificial datasets and on real-world medical datasets derived from electronic health records, produced by density-based clustering methods such as density-based spatial clustering of applications with noise (DBSCAN). To do so, we propose an innovative approach based on clustering result worsening or improving, rather than focusing on searching the "right" number of clusters like many studies do. Moreover, we also recommend open software packages in R and Python for its usage. Our results demonstrate the higher reliability of the DBCV index over CDbw, DCSI, and VIASCKDE when assessing concave-shaped, nested, clustering results.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.007
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesScholarly communication
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.827
Threshold uncertainty score0.999

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0070.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0010.001
Scholarly communication0.0020.001
Open science0.0020.002
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.048
GPT teacher head0.389
Teacher spread0.341 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it