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Record W4413856557 · doi:10.1093/noajnl/vdaf166.027

23 INVESTIGATING METABOLIC DEPENDENCIES DURING THE EVOLUTION OF GLIOBLASTOMA

2025· article· en· W4413856557 on OpenAlexaboutno aff
Maryam Al-Witry, Camille Rozon, Emilie Niu, Karen Blote, Martha Hughes, Shrivani Pirahas, John J. Kelly

Bibliographic record

VenueNeuro-Oncology Advances · 2025
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCancer, Lipids, and Metabolism
Canadian institutionsnot available
Fundersnot available
KeywordsGlioblastomaComputational biologyComputer scienceBiologyCancer research

Abstract

fetched live from OpenAlex

Abstract Brain Tumour Foundation of Canada Travel Award Recipient Glioblastoma (GBM) is the most common and aggressive form of brain cancer in adults, with a five-year survival rate of less than 7%. GBMs are difficult to treat and often recur within a year of diagnosis. Despite many attempts, treatment options have remained stagnant over decades. Clinical trials have yet to reveal an effective therapy for GBMs. This stems, in part, from an incomplete understanding of tumour biology, and lack of appropriate preclinical models to capture patient specific tumour heterogeneity. There is an urgent need for novel approaches to identify new therapies. Patient-derived organoids (PDOs) have emerged as important models, maintaining the phenotypic and genetic features of the parent tumours. PDOs are used in precision medicine to explore new therapeutic applications. Altered metabolism is a hallmark of GBM and is necessary for the growth and survival of GBMs. Here, we aim to develop and characterize matched newly diagnosed and recurrent GBM (nd-rGBM) organoids to identify phenotypic, growth and metabolic properties of GBMs. Our data indicates that nd-rGBM organoids displayed similar features such as cells expressing cycling (Ki67), stem-or progenitor-like (NES, SOX2, OLIG2), and glial (GFAP) markers compared to their parent tumours. Notably, we observed distinct growth between matched nd-rGBM pairs, with slow-growing GBMs exhibiting increased oxidative phosphorylation (OxPhos). This is important because different metabolic subtypes of GBMs are linked to varied prognoses. We, therefore anticipate our work may lead to identification of new insights into the tumour evolution and can be further exploited to identify new therapeutic strategies.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.608
Threshold uncertainty score0.477

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.262
Teacher spread0.256 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

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