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Record W4413856563 · doi:10.1093/noajnl/vdaf166.029

29 SNAT2 AS A NOVEL TARGETABLE VULNERABILITY IN RECURRENT GLIOBLASTOMA

2025· article· en· W4413856563 on OpenAlexaff
Anish Puri, José Carlos Bozelli, William Maich, Dillon McKenna, Manoj Kumar Singh, Benjamin Brakel, Lucas Asselstine, Shawn C. Chafe, Chitra Venugopal, Philip Britz‐McKibbin, Sheila K. Singh

Bibliographic record

VenueNeuro-Oncology Advances · 2025
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicUbiquitin and proteasome pathways
Canadian institutionsMcMaster University
Fundersnot available
KeywordsGlioblastomaVulnerability (computing)MedicineComputer scienceCancer researchComputer security

Abstract

fetched live from OpenAlex

Abstract Glioblastoma (GBM) is the most fatal primary brain tumour. Standard-of-care consists of surgical resection followed by chemo-radiotherapy, but the tumour almost always recurs. There are currently no effective treatments at recurrence, and this contributes to why patients with GBM have a median survival of only 13.5 months. GBM recurrence is thought to arise due to treatment-resistant GBM stem-like cells (GSCs), rendering them an important population to consider when developing effective therapeutics. A recent genome-wide CRISPR-Cas9 knockout (KO) screen in primary and recurrent GBM GSCs identified sodium-coupled neutral amino acid transporter 2 (SNAT2) as a vulnerability in recurrent GBM (rGBM), but not primary GBM (pGBM). SNAT2 transports neutral amino acids such as glycine, alanine and glutamine and is implicated in other cancers but its role in GBM remains unexplored. Here, we conducted comprehensive metabolomics comparing patient-matched pGBM and rGBM GSCs and explored the changes in the metabolome ofSNAT2 KO rGBM GSCs. We found that the metabolome of SNAT2 KO rGBM GSCs shares similarities with the metabolome of pGBM GSCs, which are notably less aggressive. Functionally, we found that SNAT2 KO in rGBM GSCs decreases proliferation, sphere formation and invasion capacity and increases the presence of reactive oxygen species in vitro. In vivo, SNAT2 KO decreases tumour burden and extends the survival of our patient-derived xenograft model of rGBM GSCs. This study bolsters SNAT2 as a novel targetable vulnerability in rGBM and provides proof of concept for future therapeutic development aiming to provide patients with additional treatment options.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.572
Threshold uncertainty score0.755

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.305
Teacher spread0.294 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

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