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Structural-Level Modeling of Biocrude Hydrodeoxygenation

2025· article· en· W4413976853 on OpenAlexafffund
Anton Alvarez‐Majmutov, Sandeep Badoga, Rafał Gieleciak, Jinwen Chen

Bibliographic record

VenueEnergy & Fuels · 2025
Typearticle
Languageen
FieldEngineering
TopicCatalysis and Hydrodesulfurization Studies
Canadian institutionsNatural Resources Canada
FundersNatural Resources CanadaOffice of Energy Research and DevelopmentGovernment of Canada
KeywordsHydrodeoxygenationChemistryOrganic chemistryEnvironmental scienceCatalysisPulp and paper industrySelectivityEngineering

Abstract

fetched live from OpenAlex

High Resolution Image Download MS PowerPoint Slide Hydrodeoxygenation is an indispensable technology in the refining of biogenic feedstocks into transportation biofuels. In this study, a modeling approach is proposed for describing the hydrodeoxygenation of biocrude from forest biomass at the structural level. It comprises a feed composition modeling block that creates a molecular representation of the biocrude feed to the hydrodeoxygenation process from available analytical measurements. The thousands of molecules representing the biocrude feed are computationally assembled via stochastic simulation adhering to a hierarchical building sequence and coded in vector notation. The reaction modeling block that follows takes these simulated feed molecules and transforms them into product molecules by applying a set of reaction rules formulated from knowledge of hydrodeoxygenation chemistry. Reactions are organized into families according to the oxygen functional group and structural characteristics of the reactant molecules. Hydrodeoxygenation rate parameters are tuned against experimental data generated in a batch reactor over a wide range of conditions, whereas adsorption and equilibrium parameters are estimated using quantitative structure–reactivity correlations. The computational simulation of the exceedingly large reaction system is handled with the kinetic Monte Carlo algorithm. The resulting simulation model is shown capable of tracking the evolution of oxygen functional groups, gaseous products, and oil and water yields with respect to reaction time and process temperature, while providing insights into reaction pathways and reactivity patterns of oxygen compound families. The model also characterizes structural changes in the oil product throughout the process and provides reasonable estimates of how much hydrogen is consumed in the process.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.182
Threshold uncertainty score0.373

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.018
GPT teacher head0.227
Teacher spread0.209 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2025
Admission routes2
Has abstractyes

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