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Record W4413986812 · doi:10.1002/edn3.70145

Combining Hydroacoustics and <scp>eDNA</scp> to Estimate Species‐Specific Biomass in a Pelagic Fish Community

2025· article· en· W4413986812 on OpenAlexaff
Victoria Kopf, Lee Frank Gordon Gutowsky, Kristyne M. Wozney, Caleigh M. Smith, Chris C. Wilson, Derrick T. de Kerckhove

Bibliographic record

VenueEnvironmental DNA · 2025
Typearticle
Languageen
FieldEnvironmental Science
TopicEnvironmental DNA in Biodiversity Studies
Canadian institutionsMinistry of Natural Resources and Forestry
Fundersnot available
KeywordsPelagic zoneFish <Actinopterygii>FisheryBiomass (ecology)SeascapeBiologyZoologyEcologyHabitat

Abstract

fetched live from OpenAlex

ABSTRACT Hydroacoustic surveys and eDNA monitoring are rapidly evolving technologies with significant applications for monitoring fish populations. Hydroacoustic technology is capable of enumerating size classes; however, species identification often relies on time‐consuming, costly, and lethal supplementary sampling methods. Environmental DNA (eDNA) detection is a nonlethal alternative for ground‐truthing hydroacoustic surveys; however, on its own, it does not provide estimates of fish size or stock biomass. We tested the utility of paired hydroacoustic and eDNA surveys by replicating samples over a 12‐h period along the depth gradient of pelagic lake habitat where the fish community exhibits diel vertical migration. Generally, we found that (1) the detection and proportion of target species estimated by eDNA was similar to those found in historical gill‐netting across depth strata, (2) eDNA‐apportioned hydroacoustic data agreed with expected diel patterns in species vertical distributions, and (3) with some exceptions, eDNA‐apportioned hydroacoustic estimates of biomass were strongly correlated with expected species biomass. Some species yielded unrealistically high concentrations in the deepest samples, suggesting that benthic accumulation of eDNA can result in inflated biomass estimates near the lake bottom. Combining eDNA and hydroacoustics as complementary noninvasive assessment tools provides a simplified species apportioning protocol for future fish populations and community assessments.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.066
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0010.001
Scholarly communication0.0000.000
Open science0.0010.003
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.222
Teacher spread0.208 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2025
Admission routes1
Has abstractyes

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