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Record W4414015807 · doi:10.11159/icbes25.137

Detection of Uropathogenic Escherichia Coli in Urine Using an Immunobiosensor Based On Antigen-Antibody Biorecognition, Coupled With Fluorescence Detection and Bead-Injection Analysis

2025· article· en· W4414015807 on OpenAlex
Eerik Jõgi, Merit Nikopensius, Toonika Rinken

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

venuePublished in a venue whose home country is Canada.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenueProceedings of the World Congress on Electrical Engineering and Computer Systems and Science · 2025
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicEnterobacteriaceae and Cronobacter Research
Canadian institutionsnot available
Fundersnot available
KeywordsEscherichia coliFluorescenceAntigenUrineBeadAntibodyChromatographyChemistryMolecular biologyMaterials scienceBiologyBiochemistryImmunologyGeneOptics

Abstract

fetched live from OpenAlex

Uroinfections, primarily caused by pathogenic bacteria such as uropathogenic E. coli (UPEC), represent a significant health challenge in today's world.The gold standard for identifying pathogens that cause uroinfection in urine samples is microbiological cultivation, which can take several days.Alternative laboratory methods, such as quantitative polymerase chain reaction (qPCR) and matrix-assisted laser desorption ionization-time of flight (MALDI-TOF) mass spectrometry, can also be employed to identify these pathogens.A promising avenue for the rapid identification of pathogens is the use of biosensors.The aim of the current study was to develop a biosensor for the swift detection of UPEC in urine samples, aiming for a limit of detection below 10 3 CFU/mL-crucial for diagnosing recurrent uroinfections and associated conditions [1].Initially, the pathogens were captured onto a single-use column, followed by specific detection using E. coli antibodies conjugated with a fluorescent marker.Utilizing a bead-injection analysis platform for fluidics enabled us to achieve limits of E. coli detection and quantification in 150 L urine samples of <3 cells/mL and <5 cells/mL, respectively.The total analysis time, including complete system regeneration, was 17 minutes [2].The results obtained from the biosensor showed a strong correlation with those from other methods, confirming that the complex urine matrix of UPEC patients did not interfere with the biosensor measurements.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.663
Threshold uncertainty score0.316

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.005
GPT teacher head0.229
Teacher spread0.224 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it