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Record W4414284261 · doi:10.1098/rsos.250514

Diversity and distribution of extracellular microcrystals in holothuroid echinoderms

2025· article· en· W4414284261 on OpenAlexafffund
Fei Gao, Jean‐François Hamel, Annie Mercier

Bibliographic record

VenueRoyal Society Open Science · 2025
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicEchinoderm biology and ecology
Canadian institutionsMemorial University of Newfoundland
FundersWorld Wildlife Fund CanadaNatural Sciences and Engineering Research Council of Canada
KeywordsBiomineralizationCalciumCalcium carbonateCalcium oxalateOxalateExtracellularIntegumentary systemCoelom

Abstract

fetched live from OpenAlex

Biomineralization research in echinoderms has been focused on skeletal structures, which provide strength and protection. Other minerals, specifically extracellular microcrystals, are described here for the first time in echinoderms. Six morphotypes were isolated from a holothuroid and classified into three chemical compounds. Uric acid crystals were associated with fluids from the hydrovascular system, perivisceral coelom and respiratory tree, while calcium carbonate crystals were detected in the epithelium of the respiratory tree and calcium oxalate dihydrate crystals were found in tissues of the cloaca, integument, Polian vesicle and tentacle. Uric acid crystals were mostly non-encapsulated in tissues, whereas, in fluids, they were often encapsulated by phagocytes, alone or in groups, suggesting that they are waste products. Calcium carbonate crystals in the respiratory tree and calcium oxalate dihydrate crystals in the cloaca suggest that they are being expelled from the body. Insofar as calcium oxalate dihydrate crystals could be involved in calcium regulation, we speculate that they might be crystallized and retained in ossicle-associated integumentary tissues and tentacles, which are susceptible to damage and could use them as a calcium reserve to synthesize and repair ossicles. Observations of microcrystals in different holothuroid species examined suggest their ubiquity in the class Holothuroidea and more generally, deuterostomes.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesScience and technology studies
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.092
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0010.001
Scholarly communication0.0000.000
Open science0.0010.004
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.238
Teacher spread0.224 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2025
Admission routes2
Has abstractyes

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