MétaCan
Menu
Back to cohort
Record W4414462368 · doi:10.1186/s12917-025-04948-w

Analysis of antibiotic use, biosecurity and mortality in semi-intensive broiler farms in Kenya

2025· article· en· W4414462368 on OpenAlexaff
Naomi P. Kemunto, Dishon Muloi, Eugine L Ibayi, Jane K. Njaramba, Vivian Hoffmann, Søren Saxmose Nielsen, Arshnee Moodley

Bibliographic record

VenueBMC Veterinary Research · 2025
Typearticle
Languageen
FieldImmunology and Microbiology
TopicAquaculture disease management and microbiota
Canadian institutionsCarleton University
FundersHORIZON EUROPE Framework ProgrammeCopenhagen Graduate School for Nanoscience and NanotechnologyConsortium of International Agricultural Research CentersKøbenhavns UniversitetEuropean Commission
KeywordsBiosecurityLogistic regressionFlockAntibioticsAntibiotic resistanceErythromycinAnimal husbandry

Abstract

fetched live from OpenAlex

The indiscriminate use of antibiotics in food-producing animals contributes to antimicrobial resistance (AMR), posing a global threat. Understanding the factors associated with antibiotic use is critical to combat resistance while maintaining animal health. This study examined antibiotic use practices, mortality rates, biosecurity levels, as well as the associations between biosecurity and antibiotic use, and between biosecurity and mortality, in semi-intensive broiler farms in Kenya.The study was conducted in 129 semi-intensive farms with total flock sizes between 200 and 2000 birds across three peri-urban counties in Kenya. Data were collected prospectively over one production cycle, with farms visited biweekly using questionnaires and a drug bin approach. Biosecurity levels were assessed by a panel of experts who weighted scores for various external and internal biosecurity subcategories. Directed acyclic graphs (DAG) described potential relationships between explanatory variables, confounders and outcome. Logistic regression analysis was conducted with antibiotic use as the outcome variable. Explanatory variables with P < 0.25 in the univariable logistic regression were included in the multivariable regression. Similarly, linear regression was conducted using mortality as the outcome.Overall, 72% of farms used antibiotics, primarily for prophylaxis (66%), with erythromycin and oxytetracycline being the most commonly used antibiotics. The median mortality rate across the production cycle was 6%. There was no significant difference in mortality between farms using antibiotics and those not using antibiotics. Biosecurity practices were low, with a median biosecurity score of 14.3/67.9. Univariable screening suggested potential associations between antibiotic use and vaccination of day-old chicks, flock size, cleaning protocol for chicken drinkers, resting period between batches, feed store cleaning, water source, distance from neighbouring farms, and age. However, these were not significant in multivariable logistic regression. Linear regression showed an association between mortality and biosecurity measures, specifically disease management and visitor entry regulation.This study highlights widespread antibiotic use, low biosecurity implementation, and variability in mortality rates in the farms surveyed. There is a gap in farmers' implementation of effective biosecurity measures and understanding of prudent antibiotic use. An urgent need exists to develop comprehensive data collection methodologies, education, and interventions to promote responsible antibiotic stewardship and cost-effective biosecurity practices among poultry farmers in Kenya.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.182
Threshold uncertainty score0.516

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.002
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.102
GPT teacher head0.390
Teacher spread0.288 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2025
Admission routes1
Has abstractyes

Explore more

Same venueBMC Veterinary ResearchSame topicAquaculture disease management and microbiotaFrench-language works237,207