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Record W4414577016 · doi:10.1101/2025.09.24.25336541

Optical Microscopy Predictions of Focal Recurrence in Glioblastoma

2025· preprint· en· W4414577016 on OpenAlexaff
S Herr, Niels Olshausen, Melike Pekmezci, Jasleen Kaur, Youssef Sibih, Vardhaan Ambati, Katie Scotford, Amit Persad, Thiébaud Picart, Akhil Kondepudi, Nancy Ann Oberheim-Bush, Albert Kim, Jacob S. Young, Mitchel Berger, Madhumita Sushil, Todd Hollon, Shawn L. Hervey‐Jumper

Bibliographic record

VenuemedRxiv · 2025
Typepreprint
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCell Image Analysis Techniques
Canadian institutionsUniversity of Saskatchewan
FundersNational Institute of Neurological Disorders and StrokeNational Cancer InstituteNational Institutes of Health
KeywordsGlioblastomaRandom forestReceiver operating characteristicCohortInfiltration (HVAC)Margin (machine learning)Decision treeMicroscopy

Abstract

fetched live from OpenAlex

Abstract A hallmark of glioblastoma (GBM) is disease recurrence, which occurs in all patients despite tumor resection, radiation, and chemotherapy. A critical challenge in glioblastoma treatment is the management of recurrent disease, for which there is no standard of care. Predicting the location of glioblastoma recurrence may improve the efficiency of advanced-stage therapies. Here, we present an artificial intelligence (AI)-based model to predict the risk of unprocessed surgical tissues at initial resection. AI-informed label-free optical microscopy was used to generate a normalized tumor infiltration value (AI-infiltration) for whole-slide optical images of samples taken from resection cavity margins. These values, in combination with clinical, radiographic, and molecular variables, were used to build a predictive model of focal recurrence. In a cohort of 80 patients, comprising 367 samples and 133,454 unique images, glioblastoma infiltration was significantly higher in margin samples from recurrent tumors (p = 0.026) compared with those from non-recurrent tumors. A random forest (RF) machine learning classifier was able to predict site recurrence with an average area under the receiver operating characteristic curve (AUC) of 86.6% ± 10.0 for the training cohort and 80.3% (95% CI: 0.641-0.965) for the validation cohort. AI-infiltration was the strongest contributor to recurrence prediction, outperforming tumor molecular features. Model performance remained high regardless of tumor location, resulting in random forest model predictions of recurrence at 5 and 10 millimeters of each sampled site. These findings represent the potential of AI to predict sites of tumor recurrence, thereby improving accessibility to targeted, precision, multimodal therapy for the highest-risk areas of disease. One Sentence Summary: Machine learning estimates of tumor infiltration predict focal glioblastoma recurrence.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.005
Threshold uncertainty score0.010

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.298
Teacher spread0.290 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

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