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<i>Petrotogales</i>

2025· other· en· W4414590346 on OpenAlexaff
Anne A. Farrell, Stéphane L’Haridon, Camilla Nesbø, Olga Zhaxybayeva

Bibliographic record

VenueBergey's Manual of Systematics of Archaea and Bacteria · 2025
Typeother
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant and Fungal Species Descriptions
Canadian institutionsUniversity of TorontoUniversity of Alberta
Fundersnot available
KeywordsGenusThermophileMesophileHabitatType (biology)Type species

Abstract

fetched live from OpenAlex

Abstract Pe.tro.to.ga'les. N.L. fem. n. Petrotoga , type genus of the order; L. fem. pl. n. suff. ‐ales , ending to denote an order; N.L. fem. pl. n. Petrotogales , the order whose nomenclatural type is the genus Petrotoga . The Petrotogales order comprises mesophilic to thermophilic bacteria, which grow optimally at salinities that range from freshwater to sea water. The cells are sheathed rods and chains that stain Gram‐negative. Members of this order are heterotrophs, anaerobes, and sulfur‐reducers. Their known habitats are shallow and deep‐sea hydrothermal vents, terrestrial hot springs, oils and gas reservoirs, and human‐made environments, such as biogas reactors, landfills, and wastewater. Petrotogales are currently grouped into a single family, Petrotogaceae . Type genus : Petrotoga Davey et al. 1993, VL47. Taxonomic and Nomenclature Notes According to the List of Prokaryotic names with Standing in Nomenclature (LPSN), the taxonomic status of the order Petrotogales is: correct name (last update, February 2025) * . LPSN classification: Bacteria / Thermotogati / Thermotogota / Thermotogae / Petrotogales The order Petrotogales can also be recovered in the Genome Taxonomy Database (GTDB) as o__Petrotogales (version v220) ** . GTDB classification: d__Bacteria / p__Thermotogota / c__Thermotogae / o__Petrotogales * Meier‐Kolthoff et al. ( 2022 ). Nucleic Acids Res , 50 , D801 – D807 ; DOI: 10.1093/nar/gkab902 ** Parks et al. ( 2022 ) Nucleic Acids Res , 50 , D785 – D794 ; DOI: 10.1093/nar/gkab776

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Other · Consensus signal: Other
Teacher disagreement score0.311
Threshold uncertainty score0.983

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0020.002
Science and technology studies0.0010.000
Scholarly communication0.0010.001
Open science0.0000.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.3110.207

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.229
Teacher spread0.222 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designNot applicable
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

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