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Record W4414767847 · doi:10.1186/s12915-025-02408-3

Multi-omics analysis reveals diapause-associated lipid remodeling in the fat body of Colorado potato beetle

2025· article· en· W4414767847 on OpenAlexaff
Doğa Cedden, Gözde Güney, Şerife Bayram, Doug Baldwin, Cathy Coutu, Dwayne D. Hegedus, Megan N. Lipke, Cansu Doğan, Russell L. Groves, Umut Toprak

Bibliographic record

VenueBMC Biology · 2025
Typearticle
Languageen
FieldEnvironmental Science
TopicPhysiological and biochemical adaptations
Canadian institutionsUniversity of SaskatchewanAgriculture and Agri-Food Canada
Fundersnot available
KeywordsTranscriptomeColorado potato beetleDiapauseLipid metabolismProteomeFat bodyComposition (language)

Abstract

fetched live from OpenAlex

BACKGROUND: The Colorado potato beetle, Leptinotarsa decemlineata (Coleoptera: Chrysomelidae), is a major pest of potato that undergoes diapause (hibernation) to survive harsh winter conditions. Lipid metabolism plays a crucial role in diapause preparation and maintenance. However, the specific changes in lipid composition and their molecular regulation remain unclear. This study integrates lipidomics, transcriptomics, and proteomics to investigate diapause-associated metabolic shifts in the fat body of L. decemlineata. RESULTS: We identified significant increases in monounsaturated (e.g., oleic acid) and polyunsaturated (e.g., linoleic acid) fatty acids, as well as phosphatidylethanolamines (membrane lipids) enriched in unsaturated fatty acids during diapause. Transcriptomic analysis revealed the differential expression of genes related to energy metabolism and lipid processing, while qualitative proteomics identified some calcium-associated protein isoforms (regucalcin-like and annexin B9-like) that are uniquely present in diapause. Correlation analysis suggested that specific transcripts, such as carboxyl ester lipase, are associated with the regulation of key lipid molecules, including oleic acid and linoleic acid, during diapause. These findings advance our understanding of lipid regulation during diapause and highlight potential molecular targets for disrupting overwintering strategies, which could inform novel pest control approaches. CONCLUSIONS: Diapause in the Colorado potato beetle is associated with changes in lipid composition in the fat body, which is mediated through changes at the transcriptome and proteome levels.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.001
Science and technology studies0.0010.000
Scholarly communication0.0010.000
Open science0.0000.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.030
GPT teacher head0.280
Teacher spread0.250 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2025
Admission routes1
Has abstractyes

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