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Record W4415112985 · doi:10.1038/s41598-025-19503-8

Reduction of Salmonella gallinarum in poultry with phage-based interventions

2025· article· en· W4415112985 on OpenAlexfundno aff
Hafsa Tariq, Audrey E. Evans, Imran Nazir, Varisra Upatising, Shafiq ur Rehman, Zafar Hayat, Tatum Pencek, Kristen Yamate, Paul Ebner

Bibliographic record

VenueScientific Reports · 2025
Typearticle
Languageen
FieldEnvironmental Science
TopicBacteriophages and microbial interactions
Canadian institutionsnot available
FundersGovernment of the United KingdomDepartment of Health and Social CareInternational Development Research CentreWellcome Trust
KeywordsSalmonellaBacteriaBacteriophagePhage therapyEnterobacteriaceaeSalmonella enterica

Abstract

fetched live from OpenAlex

Salmonella Gallinarum infections (fowl typhoid) cause significant production as well economic losses. We isolated and characterized (viability in simulated gastric fluid and simulated intestinal fluids, host-range, and genomic sequencing) four Salmonella Gallinarum phages to create a phage-based treatment for Salmonella Gallinarum infections in chickens. The phages were distinct based on genomic sequencing and effectively lysed Salmonella Gallinarum strains isolated from diseased chickens in Pakistan. Chicks (7 day-old) were challenged with Salmonella Gallinarum and treated with encapsulated phages or unprotected phages. At 1 and 4 d post-challenge (dpc), cecal Salmonella concentrations of chicks treated with unprotected (4.36 ± 0.20, and 4.02 ± 0.15 log 10 CFU/g, respectively) and encapsulated phages (5.05 ± 0.22, and 3.26 ± 0.62 log 10 CFU/g, respectively) were significantly lower ( P < 0.05) than those of untreated chicks (5.71 ± 0.13, and 4.65 ± 0.08 log 10 CFU/g, respectively). In a second animal trial, chicks were challenged with Salmonella Gallinarum but also treated with mixture (1:1) of encapsulated and unprotected phages. At 4 dpc, concentrations of Salmonella Gallinarum in the ceca of chicks treated with any form of phage were significantly lower than those of untreated chicks. At 7 dpc, however, concentrations of Salmonella Gallinarum in the ceca of chicks treated with the mixture of unprotected and encapsulated phages (2.40 ± 0.55 log 10 CFU/g) were significantly lower ( P < 0.05) than those of chicks in all other treatment groups. Taken together, these data indicate that phage treatment reduces concentrations of Salmonella Gallinarum in experimentally-challenged chickens.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.263
Teacher spread0.253 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2025
Admission routes1
Has abstractyes

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