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Record W4415181367 · doi:10.1371/journal.pcsy.0000071

The shape of waning vaccinal immunity: Implications for control

2025· article· en· W4415181367 on OpenAlexaff
Graham R. Northrup, Mike Boots, Chadi M. Saad-Roy

Bibliographic record

VenuePLOS complex systems. · 2025
Typearticle
Languageen
FieldMedicine
TopicSARS-CoV-2 and COVID-19 Research
Canadian institutionsUniversity of British Columbia
FundersAdolph C. and Mary Sprague Miller Institute for Basic Research in Science, University of California BerkeleyGordon and Betty Moore FoundationNational Science Foundation
KeywordsImmunityVaccinationPathogenPandemicImmune systemHost (biology)

Abstract

fetched live from OpenAlex

The COVID-19 pandemic and current uncertainties about H5N1 influenza underscore the importance of vaccination for both community immunity and to prevent pathogen invasion. While the duration of a fully-immune period is often included in epidemiological models with waning immunity, the relative susceptibility to infection in fully-waned individuals and moreover their interplay that determines the shape of the trajectory of waning vaccinal immunity also may have important impacts on pathogen invasion potential. In this paper, we examine pathogen invasion outcomes with a simple mathematical framework that embeds the shape of vaccinal immunity within a buffered susceptibility framework. Using illustrative examples, we show pathogen invasion hinges on the characteristics of this shape, resulting in a large variation in outcomes. A key result is that stronger immunity (i.e. a smaller relative susceptibility in fully-waned individuals) can have a dramatic impact on such invasion characteristics, but the magnitude of this effect crucially depends on the underlying shape of immunity: the initial rate of waning is critical to the outcome. Our results highlight the importance of measuring the relative susceptibility of infection in fully-waned individuals. Additionally, they illustrate the importance of characterising host immune responses granularly and of taking this into account in pathogen-specific epidemiological models.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.736
Threshold uncertainty score0.303

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.097
GPT teacher head0.377
Teacher spread0.280 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2025
Admission routes1
Has abstractyes

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