Phage host interactions reveal LPS and OmpA as receptors for two Erwinia amylovora phages
Bibliographic record
Abstract
Erwinia amylovora is the causative agent of fire blight. Resistance to streptomycin, the main antibiotic in fire blight management, has led to an urgent requirement to develop alternative biological control agents, such as the phage-carrier system (PCS). Previous studies have focused on the dynamic interactions between the carrier (Pantoea agglomerans), lytic phages, and the pathogen. However, crucial information about phage receptors on these hosts is still lacking. Here, a biochemical approach was used and the phage receptors of two E. amylovora phages (ϕEa21-4 and ϕEa46-1-A1) on both hosts, have been identified as LPS and OmpA on E. amylovora and OmpA only on P. agglomerans. Interestingly, this work uncovered for the first time that amylovoran is tightly attached to the LPS of E. amylovora. Confirmation of this interaction and an infection model are presented that have far reaching implications for additional PCS improvement and pathogen-host interaction details.
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How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.000 | 0.000 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.000 | 0.000 |
| Bibliometrics | 0.000 | 0.000 |
| Science and technology studies | 0.000 | 0.000 |
| Scholarly communication | 0.000 | 0.000 |
| Open science | 0.000 | 0.000 |
| Research integrity | 0.000 | 0.000 |
| Insufficient payload (model declined to judge) | 0.001 | 0.000 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".