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Record W4416054896 · doi:10.59275/j.melba.2025-d1g3

Investigating Demographic Bias in Brain MRI Segmentation: A Comparative Study of Deep-Learning and Non-Deep-Learning Methods

2025· preprint· en· W4416054896 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

fundA Canadian funder is recorded on the work.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenueThe Journal of Machine Learning for Biomedical Imaging · 2025
Typepreprint
Languageen
FieldComputer Science
TopicAdvanced Neural Network Applications
Canadian institutionsnot available
FundersNatural Sciences and Engineering Research Council of CanadaMcDonnell Center for Systems NeuroscienceNational Institutes of Health
KeywordsSegmentationMetric (unit)Scale-space segmentationPattern recognition (psychology)Image segmentationField (mathematics)

Abstract

fetched live from OpenAlex

Deep-learning-based segmentation algorithms have substantially advanced the field of medical image analysis, particularly in structural delineations in MRIs. However, an important consideration is the intrinsic bias in the data. Concerns about unfairness, such as performance disparities based on sensitive attributes like race and sex, are increasingly urgent. In this work, we evaluate the results of four different segmentation models (UNesT, nnU‐Net, and CoTr) and a traditional atlas-based method (ANTs), applied to segment the left and right nucleus accumbens (NAc) in MRI images. We utilize a dataset including four demographic subgroups: black female, black male, white female, and white male. We employ manually labeled gold-standard segmentations to train and test segmentation models. This study consists of two parts: the first assesses the segmentation performance of models, while the second measures the volumes they produce to evaluate the effects of race, sex, and their interaction. Fairness is quantitatively measured using a metric designed to quantify fairness in segmentation performance. Additionally, linear mixed models analyze the impact of demographic variables on segmentation accuracy and derived volumes. Training on the same race as the test subjects leads to significantly better segmentation accuracy for some models. ANTs and UNesT show notable improvements in segmentation accuracy when trained and tested on race-matched data, unlike nnU-Net, which demonstrates robust performance independent of demographic matching. Finally, we examine sex and race effects on the volume of the NAc using segmentation from the manual rater and from our biased models. Results reveal that the sex effects observed with manual segmentation can also be observed with biased models, whereas the race effects disappear in all but one model. Our findings underscore the importance of diverse and balanced datasets for equitable brain MRI segmentation and highlight the need for systematic bias analysis in developing medical imaging models.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.008
metaresearch head score (Gemma)0.002
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Research integrity
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Methods · Consensus signal: none
Teacher disagreement score0.551
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0080.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.002
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0010.002
Research integrity0.0000.004
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.040
GPT teacher head0.398
Teacher spread0.358 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it