MétaCan
Menu
← Back to cohort
Record W4416079838 · doi:10.1073/pnas.2511087122

Auxin transport positions stem cells in the vascular cambium during normal development and regeneration

2025· article· en· W4416079838 on OpenAlexaff
Xixi Zhang, Xiaoyu Wang, Ondřej Smetana, Riikka Mäkilä, Enrico Scarpella, Jing Zhang, Ari Pekka Mähönen

Bibliographic record

VenueProceedings of the National Academy of Sciences · 2025
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Molecular Biology Research
Canadian institutionsUniversity of Alberta
FundersFundamental Research Funds for Central Universities of the Central South UniversityAcademy of FinlandEuropean Research CouncilNational Natural Science Foundation of ChinaEuropean Molecular Biology Organization
KeywordsCambiumXylemVascular cambiumStem cellAuxinMeristemEndothelial stem cell

Abstract

fetched live from OpenAlex

roots, these stem cells are first established adjacent to primary xylem cells suggesting that undifferentiated primary xylem cells function as stem-cell organizers. Here, we show that auxin transport-guided auxin accumulation in the cells with primary xylem identity (PXI cells) within the root apical meristem defines the vascular cambial stem-cell organizer already during the primary development. Ablation of PXI cells or transient interference of auxin transport resulted in respecification of stem cells within the vascular bundle in a scattered manner. Similarly, ablation of cells with secondary xylem identity (SXI cells) in the mature vascular cambium resulted in the regeneration of SXI cells from stem cells within the same radial cell files. Reciprocally, ablation of stem cells in mature vascular cambium led to respecification of new stem cells from adjacent SXI cells. Thus, in response to injury, xylem identity cells and stem cells form an interchangeable unit, which we propose to define as a stem cell niche. Successful respecification of stem cells required functional auxin transport and presence of undifferentiated xylem cells. Overall, our findings reveal that undifferentiated secondary xylem functions as the stem cell reservoir and highlight the key role of auxin transport-mediated auxin accumulation in stem cell positioning during cambium development and regeneration.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.027
GPT teacher head0.254
Teacher spread0.227 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2025
Admission routes1
Has abstractyes

Explore more

Same venueProceedings of the National Academy of Sciences→Same topicPlant Molecular Biology Research→French-language works237,207→