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Record W4416158972 · doi:10.1016/j.xpro.2025.104196

Protocol for the generation of three-dimensional micropatterned neuroepithelial tissues using hPSCs, bioprinting, and matrix scaffolds

2025· article· en· W4416158972 on OpenAlexafffund
Kenneth Kin Lam Wong, Negin Imani Farahani, George E. Allen, Lisa M. Julian

Bibliographic record

VenueSTAR Protocols · 2025
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPluripotent Stem Cells Research
Canadian institutionsSimon Fraser University
FundersNatural Sciences and Engineering Research Council of CanadaCancer Research Society
KeywordsMicropatterningNeuroepithelial cellExtracellular matrixProcess (computing)Induced pluripotent stem cellMatrix (chemical analysis)Human Induced Pluripotent Stem CellsEmbryonic stem cell

Abstract

fetched live from OpenAlex

Micropatterning technology that spatially guides the self-assembly of human pluripotent stem cells (hPSCs) into neural tissues offers enhanced fidelity to investigate early neurodevelopment and disease mechanisms. Here, we present a protocol to produce micropatterned and scaffolded neuroepithelial tissues (scNETs) from hPSCs, leveraging three-dimensional (3D) bioprinting to deposit extracellular matrix (ECM) droplets with defined geometries. We describe steps for bioprinting of ECM micropatterns, hPSC culture and seeding, and the subsequent neural induction process to form scNETs within 5 days. For complete details on the use and execution of this protocol, please refer to Imani Farahani et al. 1 • Using bioprinting to model human neural tube development at Carnegie stages 13–14 • Instructions for fabricating extracellular matrix micropatterns using a 3D bioprinter • Steps for generating micropatterned and scaffolded neuroepithelial tissues from hPSCs • Guidance on characterizing neural cell type differentiation and structural phenotypes Publisher’s note: Undertaking any experimental protocol requires adherence to local institutional guidelines for laboratory safety and ethics. Micropatterning technology that spatially guides the self-assembly of human pluripotent stem cells (hPSCs) into neural tissues offers enhanced fidelity to investigate early neurodevelopment and disease mechanisms. Here, we present a protocol to produce micropatterned and scaffolded neuroepithelial tissues (scNETs) from hPSCs, leveraging three-dimensional (3D) bioprinting to deposit extracellular matrix (ECM) droplets with defined geometries. We describe steps for bioprinting of ECM micropatterns, hPSC culture and seeding, and the subsequent neural induction process to form scNETs within 5 days.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Protocol · Consensus signal: Protocol
Teacher disagreement score0.191
Threshold uncertainty score0.389

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.063
GPT teacher head0.389
Teacher spread0.326 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreProtocol

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2025
Admission routes2
Has abstractyes

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