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Record W4416224790 · doi:10.1186/s12967-025-07257-w

Protein biomarkers in pulmonary arterial hypertension: advances, clinical relevance, and translational challenges

2025· article· en· W4416224790 on OpenAlexaff
Yanqin Niu, Jinglin Tian, Steeve Provencher, Sébastien Bonnet, Olivier Boucherat, François Potus, Deming Gou

Bibliographic record

VenueJournal of Translational Medicine · 2025
Typearticle
Languageen
FieldMedicine
TopicPulmonary Hypertension Research and Treatments
Canadian institutionsUniversité Laval
FundersNational Science and Technology Major ProjectShenzhen UniversityNational Natural Science Foundation of ChinaNational Major Science and Technology Projects of ChinaInnovative Research Group Project of the National Natural Science Foundation of China
KeywordsBiomarkerBiomarker discoveryDiseaseProteomicsPersonalized medicineNatriuretic peptideTranslational research

Abstract

fetched live from OpenAlex

Pulmonary arterial hypertension (PAH) is a progressive and life-threatening disease characterized by pulmonary vasoconstriction and right ventricular dysfunction. Although classical circulating biomarkers such as brain natriuretic peptide (BNP) and N-terminal proBNP (NT-proBNP) are widely used in clinical settings, their low specificity and substantial variability limit their diagnostic and prognostic accuracy. In recent years, emerging protein biomarkers, such as Apelin, Osteopontin, and Endostatin, have provided deeper insight into disease mechanisms but require further validation. The advent of high-throughput proteomic platforms, including SOMAscan, Olink, and mass spectrometry-based assays, has revolutionized biomarker discovery by enabling the identification of novel candidates with greater sensitivity and specificity. Several proteomics-discovered biomarkers, including LTBP-2, IGFBP family members, NET4, TSP2, and FGF-23, have demonstrated superior prognostic value and may complement or surpass current standards in risk stratification. In this review, we comprehensively examine the landscape of circulating protein biomarkers in PAH, compare key proteomic technologies, and highlight translational challenges such as assay standardization and cohort heterogeneity. We propose an integrative approach combining proteomic, imaging, and genomic data to enhance precision diagnostics and personalized treatment strategies for patients with PAH.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.013
metaresearch head score (Gemma)0.012
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: Review
Teacher disagreement score0.013
Threshold uncertainty score0.071

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0130.012
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0020.001
Bibliometrics0.0020.002
Science and technology studies0.0000.002
Scholarly communication0.0040.004
Open science0.0010.002
Research integrity0.0020.003
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.056
GPT teacher head0.359
Teacher spread0.303 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2025
Admission routes1
Has abstractyes

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