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Record W4416254345 · doi:10.48550/arxiv.2509.13566

XASDB -- Design and Implementation of an Open-Access Spectral Database

2025· preprint· en· W4416254345 on OpenAlexaboutno aff
Denis Spasyuk

Bibliographic record

VenueArXiv.org · 2025
Typepreprint
Languageen
FieldPhysics and Astronomy
TopicX-ray Spectroscopy and Fluorescence Analysis
Canadian institutionsnot available
Fundersnot available
KeywordsJavaScriptX-ray absorption spectroscopyVisualizationData visualizationArchitectureResource (disambiguation)Data managementData modeling

Abstract

fetched live from OpenAlex

The increasing volume and complexity of X-ray absorption spectroscopy (XAS) data generated at synchrotron facilities worldwide require robust infrastructure for data management, sharing, and analysis. This paper introduces the XAS Database (XASDB), a comprehensive web-based platform developed and hosted by the Canadian Light Source (CLS). The database houses more than 1000 reference spectra spanning 40 elements and 324 chemical compounds. The platform employs a Node.js/MongoDB architecture designed to handle diverse data formats from multiple beamlines and synchrotron facilities. A key innovation is the XASproc JavaScript library, which enables browser-based XAS data processing including normalization, background sub- traction, extended X-ray absorption fine structure (EXAFS) extraction, and preliminary analysis traditionally limited to desktop applications. The integrated XASVue spectral viewer provides installation-free data visualization and analysis with broad accessibility across devices and operating systems. By offering standardized data output, comprehensive metadata, and integrated analytical ca- pabilities, XASDB facilitates collaborative research and promotes FAIR (Findable, Accessible, In- teroperable, and Reusable) data principles. The platform serves as a valuable resource for linear combination fitting (LCF) analysis, machine learning applications, and educational purposes. This initiative demonstrates the potential for web-centric approaches in XAS data analysis, accelerating advances in materials science, environmental research, chemistry, and biology.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.007
metaresearch head score (Gemma)0.005
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesOpen science
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Software · Consensus signal: none
Teacher disagreement score0.991
Threshold uncertainty score0.050

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0070.005
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0030.002
Science and technology studies0.0010.001
Scholarly communication0.0060.005
Open science0.0090.005
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0150.009

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.064
GPT teacher head0.403
Teacher spread0.339 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designNot applicable
Domainnot available
GenreSoftware

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2025
Admission routes1
Has abstractyes

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Same venueArXiv.orgSame topicX-ray Spectroscopy and Fluorescence AnalysisFrench-language works237,207