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Record W4416443124 · doi:10.5376/gab.2025.16.0005

Genome Polyploidization and Adaptive Evolution in Yellow Pitaya: The Impact of Gene Amplification on Stress Resistance

2025· article· W4416443124 on OpenAlexvenueno aff
Zhonggang Li

Bibliographic record

VenueGenomics and Applied Biology · 2025
Typearticle
Language
FieldAgricultural and Biological Sciences
TopicBotanical Research and Applications
Canadian institutionsnot available
Fundersnot available
KeywordsGeneGenomeGene duplicationAdaptabilityAdaptation (eye)Gene expressionMechanism (biology)Gene dosage

Abstract

fetched live from OpenAlex

Due to its excellent environmental adaptability and high economic value, yellow pitaya has gradually become an important tropical cash crop. However, the current research on the polyploidization of yellow pitaya genome and its adaptive evolution mechanism is relatively limited. This study mainly aims to reveal the relationship between gene amplification events and stress resistance during the polyploidization of yellow pitaya genome, and explore its adaptation mechanism under environmental pressures such as drought, high temperature, and salt stress. The content of the article includes the type of polyploidization of yellow pitaya genome, the molecular pathway of gene amplification, and the role in regulating the expression of anti-reverse genes. The study has shown that yellow pitaya has experienced multiple genomic replication events, resulting in a large number of amplifications of stress-resistant related genes, among which gene families such as zinc finger protein and NAC transcription factors are particularly outstanding, and the improvement of these gene amplification events to plant stress-resistant ability is confirmed through multi-level bioinformatic analysis. Combined with the research results of previous generations, we will further use multiplier cultivation of new inverse-resistant varieties of yellow pitaya to provide theoretical basis and technical support.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.002

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.019
GPT teacher head0.268
Teacher spread0.250 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

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