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Record W4416443124 · doi:10.5376/gab.2025.16.0005

Genome Polyploidization and Adaptive Evolution in Yellow Pitaya: The Impact of Gene Amplification on Stress Resistance

2025· article· W4416443124 on OpenAlex
Zhonggang Li

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

venuePublished in a venue whose home country is Canada.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenueGenomics and Applied Biology · 2025
Typearticle
Language
FieldAgricultural and Biological Sciences
TopicBotanical Research and Applications
Canadian institutionsnot available
Fundersnot available
KeywordsGeneGenomeGene duplicationAdaptabilityAdaptation (eye)Gene expressionMechanism (biology)Gene dosage

Abstract

fetched live from OpenAlex

Due to its excellent environmental adaptability and high economic value, yellow pitaya has gradually become an important tropical cash crop. However, the current research on the polyploidization of yellow pitaya genome and its adaptive evolution mechanism is relatively limited. This study mainly aims to reveal the relationship between gene amplification events and stress resistance during the polyploidization of yellow pitaya genome, and explore its adaptation mechanism under environmental pressures such as drought, high temperature, and salt stress. The content of the article includes the type of polyploidization of yellow pitaya genome, the molecular pathway of gene amplification, and the role in regulating the expression of anti-reverse genes. The study has shown that yellow pitaya has experienced multiple genomic replication events, resulting in a large number of amplifications of stress-resistant related genes, among which gene families such as zinc finger protein and NAC transcription factors are particularly outstanding, and the improvement of these gene amplification events to plant stress-resistant ability is confirmed through multi-level bioinformatic analysis. Combined with the research results of previous generations, we will further use multiplier cultivation of new inverse-resistant varieties of yellow pitaya to provide theoretical basis and technical support.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.946
Threshold uncertainty score0.326

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.019
GPT teacher head0.268
Teacher spread0.250 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it