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Record W4416451560 · doi:10.1093/jimmun/vkaf283.153

Proteomic Characterization of Preclinical Neurodegenerative Models with the NULISA™ Multiplex Murine Neuroinflammation Panel 2206

2025· article· en· W4416451560 on OpenAlexaff
Xiaojun Ma, Yan Li, Hayeun Ji, Wai Hang Cheng, Jianjia Fan, Тетяна Полякова, Carlos Barrón, Andrew Agbay, Shweta Iyengar, Sean Kim, Niyati Jhaveri, Xiaolei Qiu, Bingqing Zhang, Cheryl L. Wellington, Yuling Luo

Bibliographic record

VenueThe Journal of Immunology · 2025
Typearticle
Languageen
FieldMedicine
TopicAlzheimer's disease research and treatments
Canadian institutionsUniversity of British Columbia
Fundersnot available
KeywordsNeuroinflammationMultiplexDiseasePathogenesisBiomarkerProinflammatory cytokine

Abstract

fetched live from OpenAlex

Abstract Description Preclinical models of Alzheimer’s Disease (AD) have been valuable in deciphering the dynamics of disease pathogenesis and evaluating therapeutic strategies. However, the degree to which these models reflect the biology of the disease in humans is not known. With a growing number of preclinical models, deeper proteomic characterization can help to evaluate the differences between these model systems and their clinical utility. To this end, we have developed a 120-plex Murine Neuroinflammation Panel for detection of key neurodegenerative targets, inflammatory cytokines and growth factors. The panel was optimized and validated for murine plasma, CSF and brain lysates. Dilutional linearity, assay reproducibility and detectability were assessed at different sample input volumes. Overall, our studies show robust assay performance with <10% median intra-assay CV and <15% median inter-assay CV. Additionally, detectability in plasma is > 95%, reflecting the high sensitivity of the NULISA™ technology with background suppression mechanisms to achieve detection of a wide dynamic range of proteins. Furthermore, dilutional linearity studies showed good linearity with signal-to-noise ratio >2 for majority of the targets in the panel. Application of this panel in murine models of AD, traumatic brain injury and common strains used for preclinical research show the broad utility of the multiplex NULISAseq Murine Panel for analyzing mechanisms of neuroinflammation and disease pathology in mice. Topic Categories Neuroimmunology (NEUR)

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.046
GPT teacher head0.312
Teacher spread0.266 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

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