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Record W4416536103 · doi:10.1038/s41597-025-05513-8

Twenty years (2000–2020) of butterfly monitoring data across the contiguous United States

2025· article· en· W4416536103 on OpenAlexaff
Erica Henry, Collin B. Edwards, Vaughn Shirey, Jeffrey S. Pippen, Dave Waetjen, Matthew L. Forister, Elise A. Larsen, Cheryl B. Schultz, James Michielini, Nathan Brockman, Kevin J. Burls, Ryan G. Drum, Martha Gatch, Jeffrey Glassberg, Nancy V. Hamlett, Shiran Hershcovich, Catherine Le, Steve McGaffin, Jen Meilinger, Regina M. Rochefort, Charles D. Schelz, Arthur M. Shapiro, Kathryn Sullivan, Doug Taron, Wayne E. Thogmartin, Anna M. Walker, Jerome Wiedmann, Irmgard U Wilcockson, Jennifer M. Zaspel, Leslie Ries

Bibliographic record

VenueScientific Data · 2025
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicLepidoptera: Biology and Taxonomy
Canadian institutionsCascades (Canada)
FundersU.S. Geological SurveyU.S. Fish and Wildlife ServiceIsrael Institute for Biological ResearchU.S. Department of the InteriorNational Science Foundation
KeywordsButterflyTaxonomy (biology)BiodiversityPopulationTaxonomic rankOccupancy

Abstract

fetched live from OpenAlex

We present the most comprehensive, integrated, butterfly monitoring dataset ever assembled for the United States. It contains over 1.2 million count records, from 65,000 surveys, representing over 12.6 million individual butterflies. To compile this dataset, we integrated data and harmonized taxonomy across 19 butterfly monitoring programs in the United States - one national, 13 statewide, and 5 local (e.g. individual county or National Park) in scale. In addition to the data, we also provide the taxonomic dictionary used to crosswalk butterfly taxonomy across programs, and the code used to assemble the integrated dataset. The publication of this dataset will inspire new analyses of butterfly population trends and drivers that help to identify solutions to the biodiversity crisis.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.003
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.150
Threshold uncertainty score0.299

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.003
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0030.006
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0040.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.041
GPT teacher head0.321
Teacher spread0.281 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

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