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Record W4416562905 · doi:10.1021/acs.biomac.5c02216

Deformation-Induced Enthalpy–Entropy Competition Governs Cellular Penetration of Elastic Polymer Nanoparticles: Molecular Thermodynamic–Dynamic Simulations

2025· article· en· W4416562905 on OpenAlexaff
Xianyu Song, Ruipeng Lai, Hongchao Liu, Sijia Wang, Honglai Liu, Shuangliang Zhao

Bibliographic record

VenueBiomacromolecules · 2025
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicLipid Membrane Structure and Behavior
Canadian institutionsArtificial Intelligence in Medicine (Canada)
FundersChongqing Municipal Education CommissionNatural Science Foundation of ChongqingNational Natural Science Foundation of China
KeywordsWettingElasticity (physics)PolymerMembranePenetration (warfare)Molecular dynamicsNanoparticleMetastability

Abstract

fetched live from OpenAlex

The mechanical elasticity of polymeric nanoparticles (NPs) critically governs their interactions with biological membranes, yet the coupled thermodynamic-dynamic mechanisms remain insufficiently resolved. Here, a molecular thermodynamic-dynamic (MTD) framework integrating coarse-grained molecular dynamics, umbrella sampling, well-tempered metadynamics, and transition-state theory is established to elucidate elasticity-regulated penetration. NP deformability drives an enthalpy-entropy competition that shapes depth-dependent free-energy landscapes and translocation behavior. Soft NPs (<100 kPa) exhibit enthalpy-dominated attractions and metastable interfacial wetting that hinder penetration, whereas hard NPs (>1 MPa) display entropy-driven profiles, reduced enthalpic contributions, and accelerated, deeper translocation accompanied by membrane wrapping. Intermediate NPs display a temperature-driven enthalpy-entropy crossover. Dynamically, hard NPs translocate across membranes more rapidly and to greater depths than their soft counterparts. TEM and AFM measurements corroborate the distinct wetting and wrapping behavior. These findings establish a unified thermodynamic-dynamic paradigm for NP-membrane interactions and guide the rational design of nanocarriers.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.012
Threshold uncertainty score0.836

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.005
GPT teacher head0.241
Teacher spread0.236 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2025
Admission routes1
Has abstractyes

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