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Balancing Cohort Size and Variability in Iterative Deep Brain Template Creation

2025· article· en· W4416669939 on OpenAlexaboutno aff
Dorian Vogel, Vittoria Bucciarelli, Marc Jermann, Teresa Nordin, J. Coste, Jean‐Jacques Lemaire, Karin Wårdell, Simone Hemm

Bibliographic record

Venuenot available
Typearticle
Languageen
FieldMedicine
TopicNeurological disorders and treatments
Canadian institutionsnot available
FundersNational Science Foundation
KeywordsCohortProbabilistic logicPipeline (software)Normalization (sociology)TemplateDicePattern recognition (psychology)

Abstract

fetched live from OpenAlex

Most studies conducting probabilistic mapping of the effect of deep brain stimulation (DBS) use an external anatomical reference such as those of the MNI (Montreal Neurological Institute, [1]), alternatively, group-specific templates can be generated to avoid external anatomical bias. This study investigates the effect of cohort size on the creation of such anatomical references for movement disorders. Pre-operative MRI data from 70 patients implanted with DBS systems were used to generate anatomical templates with varying cohort sizes (5 to 67 subjects). An iterative non-linear normalization pipeline was employed to optimize template generation. Template variability was assessed using Dice overlap of anatomical structures. The templates created with 44 subjects achieved an optimal balance between variability and precision. Tukey's HSD test confirmed significant differences between iterations and cohort sizes. This study underscores the importance of cohort size and iterative registration methods in creating high-quality anatomical templates.Clinical relevance- The findings provide insights into the optimal cohort size for creating group-specific anatomical brain templates.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.033
metaresearch head score (Gemma)0.098
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.033
Threshold uncertainty score0.173

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0330.098
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0010.001
Scholarly communication0.0020.001
Open science0.0010.003
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.279
Teacher spread0.273 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

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