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Record W4416706631 · doi:10.1093/braincomms/fcaf459

Data-driven probabilistic mapping of the spatial and molecular landscape of glioma

2025· article· en· W4416706631 on OpenAlexaff
Nardin Samuel, Jürgen Germann, Andrew Yang, Can Sarica, Alexandre Boutet, Artur Vetkas, Brendan Santyr, Stefan Lang, Davide Chicco, Andrés M. Lozano

Bibliographic record

VenueBrain Communications · 2025
Typearticle
Languageen
FieldMedicine
TopicGlioma Diagnosis and Treatment
Canadian institutionsToronto Western HospitalOntario Brain InstituteUniversity of TorontoUniversity of British ColumbiaUniversity Health Network
Fundersnot available
KeywordsGliomaIsocitrate dehydrogenaseNeuroimagingProbabilistic logicMagnetic resonance imagingTemporal lobePositron emission tomography

Abstract

fetched live from OpenAlex

Understanding the spatial distribution of gliomas in the brain and their molecular subtypes can aid in the diagnosis and development of targeted therapies. This study aims to create probabilistic radiologic maps of glioma locations using large MRI datasets and the most recent consensus brain tumour classification. Neuroimaging data from multiple databases were analysed. Patients included had MRI T1 images and validated tumour segmentations. Probabilistic tumour maps were generated whereby binary tumour masks were aligned to a standard brain template and aggregated to compute voxel-wise frequency maps of glioma occurrence detailing glioma volume, molecular subtype, age, sex and overall survival with tumour location. The study included 2164 patients with gliomas. Key findings include distinct spatial patterns associated with glioma size and molecular subtype: smaller tumours favoured the left temporal region, medium-sized tumours the medial frontoparietal and bilateral temporal regions and larger tumours the frontotemporoparietal regions, predominantly on the right. Isocitrate dehydrogenase (IDH)-wild-type tumours were more common in medial parietotemporal regions, while IDH-mutant tumours were preferentially found in frontotemporal regions. Younger patients had more frontal tumours, while older patients had higher parieto-occipital tumour burdens. Tumours in medial structures and parietal lobes were linked to lower survival, whereas right temporal tumours were associated with higher rates of survival. These findings likely correlate with IDH mutation status. Leveraging eight glioma databases, probabilistic tumour maps revealed significant relationships between brain regions, molecular subtypes and clinical outcomes. These findings could be used in clinical decision-making and offer insights into glioma pathogenesis and treatment of patients impacted by this disease.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.342
Threshold uncertainty score0.135

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.041
GPT teacher head0.314
Teacher spread0.273 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

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