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Record W4416783556 · doi:10.1002/pld3.70125

Comparative Proteomic Analysis of Self‐Compatible <i>Turnera</i> Mutants Suggests <i>Glutathione S‐Transferase 8</i> Is Involved in Overcoming S‐Morph Female Self‐Incompatibility Response

2025· article· en· W4416783556 on OpenAlexafffund
Paige M. Henning, Paul D. J. Chafe, Hasan Hamam, Joel S. Shore

Bibliographic record

VenuePlant Direct · 2025
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant Reproductive Biology
Canadian institutionsYork University
FundersNatural Sciences and Engineering Research Council of CanadaNational Science Foundation
KeywordsMutantGeneBrassinosteroidMatingJasmonic acidMating typeOutcrossingMicroarray analysis techniquesPhenotype

Abstract

fetched live from OpenAlex

ABSTRACT Distyly is a reproductive system, characterized by the presence of two floral morphs, which promotes outcrossing via physical and biochemical means. In distylous Turnera , the mating type of the S‐morph is determined by two genes: YUC6 (male) and BAHD (female). Despite the importance of these S ‐genes, it is likely that additional genes are involved in the distylous syndrome. Here, we use comparative mass spectrometry analysis to identify differentially expressed proteins in a series of self‐compatible mutants and wildtype distylous members of Turnera . Our analysis identified a member of the Glutathione S‐transferase family that overwhelmingly correlated with L‐morph male mating type. Exploration of the large datasets and previously published work led to the proposal that differential ROS levels in the pistil may contribute towards the self‐incompatibility response. To support this hypothesis, we generated a co‐expression network for whole flower buds from self‐compatible and WT Turnera joelii . This network led to the identification of a series of ROS and auxin‐related genes that correlated with self‐compatibility. We update previously proposed SI response models to reflect how ROS, jasmonic acid, and brassinosteroid signaling likely establish the S‐morph female self‐incompatibility response. Overall, this work has identified genes potentially related to self‐compatibility and has provided a foundation for future empirical work investigating the basis of the SI response in Turnera .

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.016
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.277
Teacher spread0.261 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes2
Has abstractyes

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