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Record W4417015618 · doi:10.5376/cgg.2025.16.0027

Regulatory Role of Promoter Variants in Cotton Stress-Responsive Genes

2025· article· W4417015618 on OpenAlexvenueno aff
Jinhua Cheng, Mengting Luo

Bibliographic record

VenueCotton Genomics and Genetics · 2025
Typearticle
Language
FieldAgricultural and Biological Sciences
TopicResearch in Cotton Cultivation
Canadian institutionsnot available
Fundersnot available
KeywordsGeneAdaptabilityTranscription factorAbiotic stressPromoterGermplasmFunction (biology)Environmental stressHistoneGene–environment interaction

Abstract

fetched live from OpenAlex

Cotton, as one of the world's important economic crops, often faces abiotic stresses such as drought, saline-alkali conditions and extreme temperatures. These environmental pressures severely restrict its growth and development as well as the stability of its yield. In recent years, molecular genetic studies have shown that promoter variations play a key role in regulating the expression of stress response genes in cotton. This study systematically reviewed the structure and function of promoters, the classification and characteristics of cotton stress-response genes, as well as the types of promoter variations involved in regulation. It focused on analyzing how promoter polymorphisms lead to transcriptional regulatory differences under stress conditions and affect cotton's adaptability to environmental stress. The molecular mechanisms such as sequence variations in the promoter region, DNA methylation, histone modification, and transcription factor interactions were also deeply explored. Key stress response genes such as AtDREB1A , GhHSP70 , and GhERF1 were selected, and the specific functional manifestations of their promoter variations in salt tolerance, heat resistance, and drought resistance traits were introduced. This research is expected to provide new ideas for a deeper understanding of the regulatory network of plant environmental adaptability and promote the functional exploration and stress resistance improvement of cotton germplasm resources.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.259
Teacher spread0.243 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

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