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Record W4417066994 · doi:10.1021/acs.jmedchem.5c01998

Structure-Guided Optimization of Selective Covalent Reversible Peptidomimetic Inhibitors Targeting TMPRSS6

2025· article· en· W4417066994 on OpenAlexafffund
Walid Guerrab, Matthieu Lepage, Antoine Désilets, Alexandre Joushomme, Michael Desgagné, Ulrike Froehlich, Richard Leduc, Pierre‐Luc Boudreault

Bibliographic record

VenueJournal of Medicinal Chemistry · 2025
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicProtease and Inhibitor Mechanisms
Canadian institutionsUniversité de Sherbrooke
FundersCanadian Institutes of Health Research
KeywordsPeptidomimeticTMPRSS6ProteasesSerine proteaseSerineRational designSelectivityProteaseStructure–activity relationship

Abstract

fetched live from OpenAlex

Developing selective protease inhibitors is a challenging task due to the high structural resemblance of their catalytic pockets. Here, we aimed to develop selective inhibitors targeting TMPRSS6, a protease involved in regulating iron homeostasis. By exploiting structural differences in the catalytic subpockets between TMPRSS6 and matriptase, we optimized ketobenzothiazole-based peptidomimetics using the P4-P3-P2-Arg-Kbt scaffold. We found that a combination of bulky residues at P4 and P3, along with polar amino acids at P2, enhance selectivity while preserving high potency. Notably, WGU55 showed exceptional selectivity toward TMPRSS6 over matriptase and minimal off-target inhibition of coagulation serine proteases such as Factor Xa and Thrombin, representing, to our knowledge, the most selective TMPRSS6 inhibitor identified to date. Cell-based assays confirmed the inhibitor's high potency and selectivity. These findings validate a rational design strategy for the selective inhibition of TMPRSS6, paving the way for the development of targeted therapeutics based on peptidomimetics.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.005
GPT teacher head0.244
Teacher spread0.239 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes2
Has abstractyes

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