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Record W4417288303 · doi:10.3791/67538

Mechanical Mapping of Spheroids Using Brillouin Spectroscopy

2025· article· en· W4417288303 on OpenAlexaff
Giedrė Astrauskaitė, Rebecca E. Ginesi, Theodora Rogkoti, Greg Wardle, Troy R. Allen, Oana Dobre, Massimo Vassalli, Matthew C. Walker

Bibliographic record

VenueJournal of Visualized Experiments · 2025
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCellular Mechanics and Interactions
Canadian institutionsLightMachinery (Canada)
Fundersnot available
KeywordsBrillouin SpectroscopyBrillouin zoneMicroscale chemistryBrillouin scatteringSpectroscopySpheroidExtracellular matrixViscoelasticity

Abstract

fetched live from OpenAlex

Brillouin spectroscopy, an emerging technique gaining significant interest in biomedical science, allows researchers to gather information related to mechanics and structure by interrogating the viscoelastic and architectural properties of specimens in a non-destructive, contact-free manner. This approach evaluates the mechanical properties of 3D samples by measuring the interaction of visible light with thermally induced acoustic waves/phonons. The information that Brillouin spectroscopy provides has potential for in vivo assessment of biophysics and potential diagnosis of disease pathologies. A significant advantage of Brillouin spectroscopy is the capability to assess microscale mechanics inside a biological sample; other conventional techniques that can achieve this resolution, such as atomic force microscopy, can only probe samples in 2D since they require direct contact. This work describes the application of Brillouin micro-spectroscopy to investigate the biomechanics of living spheroids embedded within a 3D hydrogel matrix. Encapsulation of cellular spheroids within a 3D microenvironment establishes a spheroid system that closely recapitulates the interface between cells and the extracellular matrix in vivo. In our protocol, we describe spheroid sample preparation and measurements of Brillouin spectra with sequential fluorescence imaging. Additionally, we discuss procedures for spectral data analysis and technical details about the optical system.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.027
GPT teacher head0.420
Teacher spread0.393 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

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