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Record W4417312349 · doi:10.3389/fbioe.2025.1716394

Editorial: Development of point-of-care sensors for diagnosis of bacterial-associated infections

2025· article· en· W4417312349 on OpenAlexaff
Maria Leilani Torres‐Mapa, Janina Bahnemann, Katharina Nikutta, Sofia Arshavsky‐Graham

Bibliographic record

VenueFrontiers in Bioengineering and Biotechnology · 2025
Typearticle
Languageen
FieldEngineering
TopicBiosensors and Analytical Detection
Canadian institutionsUniversity of British Columbia
Fundersnot available
KeywordsLoop-mediated isothermal amplificationGold standard (test)Point of careDetection limitPolymerase chain reactionAnalyteBacteriaConcordance

Abstract

fetched live from OpenAlex

Among the contributions, one study reported a loop-mediated isothermal amplification (LAMP) assay targeting the community-acquired respiratory distress syndrome (CARDS) toxin gene of Mycoplasma pneumoniae, achieving nearly perfect concordance with quantitative real-time polymerase chain reaction (qPCR) across 200 clinical respiratory samples. The method is highly specific and showed no crossreactivity to most common respiratory pathogens or toxins. Its speed, ease of use, and high specificity, positions it well for decentralized diagnostic settings. Another article applied droplet digital PCR (ddPCR) to enhance early diagnosis, prognosis, and pathogen verification in bloodstream infections among elderly patients, emphasizing its potential in critical care contexts. Using blood culture, as the benchmark for bacterial and fungal bloodstream infections, ddPCR demonstrated high sensitivity and detected most clinically relevant bacterial species. Detection of Helicobacter pylori-a major gastrointestinal pathogen-was addressed via an electrochemical aptasensor using silver nanoparticles on graphene oxide with electrodeposited gold nanoparticles, enabling sensitive measurements in blood and stool. The aptasensor exhibited high sensitivity with detection limit ~ 3 CFU/ml, high reproducibility as well as high specificity. A further study harnessed pyrolysis, gas chromatography, and ion mobility spectrometry to rapidly identify several bacteria species present in an oral peri-implant environment, through volatile fragment-derived signatures. The characteristic inverse reduced ion mobility as a function of gas chromatography retention time showed high degree of similarities among the pyrolyzed bacteria but also differences unique to certain bacterial strains. By building a model trained on the measurements from reference bacterial samples, a classification accuracy of over 97% was achieved at the genus level, offering a novel, gas-phase diagnostic route.Complementing these analytical advances, a systematic review evaluated current three-dimensional (3D) in vitro models for implant-associated infections. The review highlights their significance and limitations in understanding the complexity of hostimplant-microbe interactions and developing new therapies. Furthermore, the review underscores the importance of creating biomimetic environments, especially relevant for realistic sensor testing and validating PoC platforms. In the realm of non-invasive diagnostics, artificial intelligence (AI) was leveraged using a YOLOv8 deep learning model to analyze panoramic radiographs for periodontal disease, demonstrating performance that surpassed trained clinicians in both accuracy and sensitivity. From an engineering perspective, a custom 3D-printed, optically accessible flow chamber equipped with integrated sensors enabled real-time tracking of multispecies oral biofilm growth, advancing capabilities for dynamic biofilm monitoring. Finally, a detection method based on recombinase polymerase amplification (RPA) assay combined with CRISPR/Cas12a successfully identified both Klebsiella pneumoniae and its KPC resistance gene. Detection read-outs, among them fluorescence, blue light irradiation, ultraviolet and lateral flow test strips were tested with the latter three methods enabling detection without sophisticated instrument. This work demonstrated the potential of such an assay to be implemented in a highly specific, rapid PoC platform especially relevant for AMR scenario.Taken together, these eight manuscripts demonstrate the richness of approaches being advanced-from molecular amplification assays and electrochemical platforms to AI-based imaging, 3D models, and CRISPR-powered detection. Each contribution addresses specific gaps in PoC diagnostics while collectively advancing the field toward clinical translation.The body of work presented in this Research Topic underscores how far PoC sensor development for bacterial infections has progressed in recent years. Emerging themes include the increasing adoption of isothermal amplification technologies, the growing role of artificial intelligence in enhancing diagnostic precision, and the use of 3D models to create more realistic environments for sensor testing. Moreover, platforms integrating CRISPR-based specificity or advanced nanomaterials highlight how molecular biology and materials science can converge to deliver powerful new diagnostic capabilities.Looking ahead, several priorities are evident. Integration of AI into PoC devices will be key for enabling automated result interpretation and supporting clinical decisionmaking in real time. The development of multiplexed assays capable of detecting pathogens alongside antimicrobial resistance determinants will be crucial for guiding appropriate therapy. Diagnostic approaches, such as imaging or volatile organic compounds-based sensing, have the potential to greatly improve patient experience and broaden access. Finally, rigorous clinical validation and attention to implementation in low-resource settings will determine the real-world impact of these technologies.In conclusion, this Research Topic illustrates the extent of innovation currently reshaping the landscape of PoC diagnostics for bacterial-associated infections. By uniting molecular, engineering, computational, and clinical perspectives, these contributions point toward a future in which fast, accurate, and accessible diagnostics will play a central role in combating bacterial infections and mitigating the threat of antimicrobial resistance.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.340
Threshold uncertainty score0.406

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.004
GPT teacher head0.197
Teacher spread0.194 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2025
Admission routes1
Has abstractyes

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