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Record W4417321508 · doi:10.1016/j.sbi.2025.103190

The current understanding of KRAS oligomerization on membranes

2025· article· en· W4417321508 on OpenAlexaff
Nastazia Lesgidou, Michail Papadourakis, Nishita Mandal, Sepehr Dehghani‐Ghahnaviyeh, Camilo Velez‐Vega, José S. Duca, Zoe Cournia

Bibliographic record

VenueCurrent Opinion in Structural Biology · 2025
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicProtein Kinase Regulation and GTPase Signaling
Canadian institutionsDiscovery Centre
Fundersnot available
KeywordsKRASEffectorMembraneSignal transductionNanoclustersSmall moleculeCell signaling

Abstract

fetched live from OpenAlex

KRAS, a member of the RAS family of small GTPases, is frequently mutated in cancers and localizes to the inner leaflet of the plasma membrane, where it has been suggested to form dimers and higher-order oligomers (nanoclusters). These nanoclusters are dynamic, reversible, and may be critical for signal amplification and specificity. In this perspective, we review the current understanding of KRAS oligomerization on membranes and its relevance for downstream signaling. Moreover, we discuss potential KRAS-KRAS interfaces, the effectors contributing to nanoclustering, such as the influence of the membrane lipid composition on KRAS nanoclustering, and outline the effect of small molecules on the RAS signaling pathway and nanoclustering.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.471
Threshold uncertainty score0.314

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.042
GPT teacher head0.349
Teacher spread0.307 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

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