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Record W4417486080 · doi:10.3389/fbrio.2025.1735305

Isolation of non-symbiotic phosphate-solubilizing plant growth-promoting Paraburkholderia strydomiana

2025· article· en· W4417486080 on OpenAlexaffabout
Ambihai Shayanthan, Anna Motnenko, Justin P. Hawkins, Ivan J. Oresnik

Bibliographic record

VenueFrontiers in Bacteriology · 2025
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant-Microbe Interactions and Immunity
Canadian institutionsUniversity of Manitoba
Fundersnot available
KeywordsNitrogen fixationBacteriaGenomePhosphatePhosphorusIsolation (microbiology)NutrientBiofertilizerPhosphate solubilizing bacteria

Abstract

fetched live from OpenAlex

Phosphorus is a key nutrient needed for plant growth and is often found in soils in an insoluble form. While phosphate fertilizers promote quick plant growth, they can be easily converted to insoluble forms through soil processes or lost via runoff. This results in poor phosphate use efficiency, which is economically and environmentally costly. A possible way to remediate these problems is to introduce phosphate-solubilizing bacteria as a biological fertilizer. In this work, we report the isolation of eight phosphate-solubilizing bacteria from agricultural soils in Manitoba. Their ability to solubilize Ca 3 (PO 4 ) 2 ranged from 95 to 144 mg/dL. Based on whole-genome sequencing, the isolates consisted of six Paraburkholderia strydomiana isolates, comprising at least three distinct strains, a Paraburkholderia graminis , and a Burkholderia ambifaria isolate. In addition to solubilizing phosphate, the P. strydomiana strains visibly influenced soybean seedling growth. Utilizing the closed genomes from the isolates in this study, we were able to scaffold the type strain and show that P. strydomiana genomes appear to consist of two large replicons as well as a larger plasmid. Further genomic analysis also demonstrated that P. strydomiana appears to contain RuBisCO and a complete Calvin-Benson-Bassham pathway. Unlike the type strain, the isolates in this study did not carry genes associated with nitrogen fixation or the ability to form symbiotic associations.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.213
Teacher spread0.203 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes2
Has abstractyes

Explore more

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