MétaCan
Menu
Back to cohort
Record W6891603225 · doi:10.48448/kxny-x843

Human skin and nerve derived Schwann cells exhibit subtle transcriptomic and functional differences

2021· other· en· W6891603225 on OpenAlexaff

Bibliographic record

VenueUnderline Science Inc. · 2021
Typeother
Languageen
Field
Topic
Canadian institutionsUniversity of Calgary
Fundersnot available
KeywordsSchwann cellRemyelinationTranscriptomeHuman skinIn vitroRegeneration (biology)In vivoGene expressionNerve growth factorNerve injury

Abstract

fetched live from OpenAlex

Schwann cells (SCs) support peripheral nerve regeneration, but the efficacy of this regeneration is limited. Introducing exogenous SCs to the site of peripheral nerve injury is an ongoing avenue of investigation as a cellular therapy to enhance regeneration. Approaches that utilize an accessible source of a patient's own cells would greatly facilitate clinical translation. Previous work demonstrates that skin-derived SCs are able to promote axonal growth and remyelination in murine models of nerve injury, however, it is not clear whether skin-derived and nerve-derived SC are functionally equivalent. To this end, we isolated SCs from small skin samples and then subjected them to high resolution single-cell mRNA sequencing (scRNA-seq) followed by battery of in vitro and in vivo assays. Our genomic analyses revealed close to 95% similarity between skin and nerve SCs at differential gene level while gene network analysis showed mostly overlapping profiles between the two cell types with the exception of immune regulatory family (eg. IRF) upregulated in skin SCs. In vitro assays revealed similarity in proliferation, migration and expression of epidermal growth factor between the two cell types, which is in alignment with our genomic analysis. However, we observed subtle difference such as higher expression of VEGF and collagen content in skin SCs and higher expression of TGF-alpha in nerve SC. Overall, our results showed that skin and nerve Schwann cells share mostly identical properties with subtle differences, suggesting that skin may be a viable source of Schwann cells to improve nerve repair.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.014

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0040.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.033
GPT teacher head0.265
Teacher spread0.232 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2021
Admission routes1
Has abstractyes

Explore more

Same venueUnderline Science Inc.French-language works237,207