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Record W6892092302 · doi:10.5061/dryad.k0p2ngf72

An integrated phylogenetic reassessment of the parasitoid superfamily Platygastroidea (Hymenoptera: Proctotrupomorpha) results in a revised familial classification

2021· dataset· en· W6892092302 on OpenAlexaff

Bibliographic record

VenueOpen MIND · 2021
Typedataset
Languageen
Field
Topic
Canadian institutionsAgriculture and Agri-Food Canada
FundersNational Natural Science Foundation of China
KeywordsPhylogenetic treeParasitoidSUPERFAMILYPhylogeneticsMonophylyTaxonScelionidae

Abstract

fetched live from OpenAlex

The superfamily Platygastroidea (Hymenoptera: Proctotrupomorpha) is a diverse group of parasitoid wasps that attack nine orders of insects as well as spiders. They appear to show a clear pattern of host group specificity among genera. A robust phylogeny is essential to understanding the monophyly of and relationships among lower level groups and the pattern of the shifts among host groups. We conducted phylogenetic analyses of Platygastroidea based on four molecular markers (18S, 28S, COI, and wingless) combined with 119 morphological characters, and a phylogenomic analysis of a subset of taxa based on 4,371 single-copy, protein-coding genes. The four-gene and morphological analyses robustly recovered some well-established groups, e.g., Platygastridae (in its traditional sense), Scelionini, Teleasinae and Telenominae, as well as some novel patterns of relationship. The ground-plan host for the superfamily are the eggs of Orthoptera, with possible parallel shifts to attack hosts in the Coleoptera, Diptera, Hemiptera and Mantodea. The basal relationships for the superfamily as well as relationships among genera traditionally classified in the scelionine tribes Baryconini, Calliscelionini and Psilanteridini were not supported. The phylogenomic analysis of representative basal taxa recovered a clear pattern of relationships with maximal bootstrap support. Based on the combination of these two approaches, we present a revised classification for Platygastroidea and recognize the following eight families: Geoscelionidae stat. rev., Janzenellidae fam. nov., Neuroscelionidae fam. nov., Nixoniidae stat. rev., Platygastridae stat. rev., Proterosceliopsidae†, Scelionidae stat. rev. and Sparasionidae stat. rev.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Dataset · Consensus signal: none
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.056
GPT teacher head0.345
Teacher spread0.289 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreDataset

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2021
Admission routes1
Has abstractyes

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