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Record W6893985273 · doi:10.5281/zenodo.5915225

Polydora websteri Hartman

2021· article· en· W6893985273 on OpenAlexaboutno aff

Bibliographic record

VenueZenodo (CERN European Organization for Nuclear Research) · 2021
Typearticle
Languageen
FieldEarth and Planetary Sciences
TopicMarine Biology and Ecology Research
Canadian institutionsnot available
Fundersnot available
KeywordsOysterTaxonomy (biology)South asiaGenetic data

Abstract

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Polydora websteri Hartman, in Loosanoff and Engle 1943 (Figs 4–7) Polydora websteri: Hartman, in Loosanoff & Engle 1943: 70–72, Fig. 1 Polydora websteri: Blake 1969: 814–815, Fig. 2; Blake 1971: 6–8, Fig. 3; Foster 1971: 26; Blake & Kudenov 1978: 258–259, Figs 43k–n; Handley & Bergquist 1997: 191–205; Radashevsky & Williams 1998: 212–216; Radashevsky 1999; 107–113, Fig. 1; Sato-Okoshi 1999: 832–834, Fig. 2B; Surugiu 2005: 67; Bonifácio 2009; Read 2010: 9–11, Figs 1H–J, 2B, 2D, 2F, 4D–G; Surugiu 2012: 50–53, Fig. 3; Sato-Okoshi & Abe 2013: 1280–1281, Fig. 2; Sato-Okoshi et al. 2013, 153–159, Fig. 5; Ye et al. 2017; Rice et al. 2018 Polydora cf. ciliata: Simon 2011 Polydora haswelli: Sato-Okoshi et al. 2008: 495, Fig. 4F, G Polydora cf. websteri: Williams 2015; Simon 2015; Simon & Sato-Okoshi 2015; Williams et al. 2017 Material examined. South Africa: Eastern Cape, Nelson Mandela Bay; 33°50′0″ S, 25°50′0″ E; SAMC-A089084 - SAMC-A089088 (1 specimen each); SAMC-A089094 (16 complete and 2 incomplete specimens), SAMC-A089181 (1 specimen); August 2017; C. A. Simon; from cultured Crassostrea gigas. Type material examined. United States of America: Connecticut, Long Island Sound; Lectotype (LACM-AHF POLY 1628); 4 January 1943; J. B. Engle; mouth of Milford River; from vesicles on empty oyster shells. Additional material examined. South Africa: Eastern Cape, Nelson Mandela Bay; 33°50′0″ S, 25°50′0″ E; 26 specimens sacrificed for genetic analysis; August 2017; C. A. Simon; from cultured C. gigas. South Africa: Northern Cape, Kleinzee; 29°39′59″ S, 17°04′60″ E; 7 specimens sacrificed for genetic analysis; November 2012; C. A. Simon; from cultured C. gigas. Description of P. websteri from South Africa. Complete specimens 4.7 to 22 mm long and 0.32 to 0.95 mm wide at chaetiger 5 (n = 22), for up to 39 to 123 chaetigers (n = 20). Prostomium anteriorly bilobed or weakly bilobed; caruncle extending to mid chaetiger 2 or up to end chaetiger 3 (Figs 4A, C, 5A, D, L, M); eyes usually absent, but up to 4 arranged in trapezoid when present; occipital antenna absent (Figs 4C, 5L, M). Body pigmentation absent; palps with distinct continuous black pigmentation lines adjacent to the food groove (Fig. 5B, C). Notochaetae absent on chaetiger 1, notopodial lobe small. Winged capillary notochaetae with postchaetal lamellae on chaetigers 2 to 4 and 6. Capillary notochaetae with postchaetal lamellae on posterior chaetigers reducing in size posteriorly. Winged neurochaetae with postchaetal lamellae increasing in size from chaetigers 1 to 4 and 6. Neurochaetae replaced by bidentate hooded hooks in vertical row on chaetiger 7 (Figs 4B, C, 5F, J, L, M); up to 7 hooded hooks per fascicle, increasing to 11 in middle chaetigers, decreasing to 1 or 2 on posterior chaetigers. Hooded hooks without companion chaetae; main fang at <45° to apical tooth and right angle to shaft; with constriction on shaft (Fig. 6B). Chaetiger 5 modified, approximately twice as long as chaetigers 4 and 6 (Figs 4A, B, C, 5A, D, F, J, L, M); superior (Fig. 6C) and inferior (Fig. 6D) winged chaetae shorter than capillary chaetae on the preceding chaetigers. Thick falcate spines on chaetiger 5 with prominent flange on concave side of spine (Figs 6A, C), no tooth; up to 7 spines in slightly curved row (Figs 4B, C, 5A, D, F, J, L, M); spines alternating with pennoned companion chaetae, tips occasionally frayed (Fig. 6A). Branchiae present from chaetiger 7 onwards (Figs 4A, C, 5A, D, L, M), covering approximately 50 % of chaetigers, longest on chaetigers 11 to 25 (Figs 4D, F, 5E). Pygidium cup to disc-shaped, with dorsal notch leading to anus, 1.5 (±0.31) times wider than 5 th last chaetiger (Figs 4G, H, 5H, N). Staining pattern. Palps without staining pattern or a line of blue staining pigment adjacent to the continuous black pigmentation lines (Fig. 5B). Branchiae without staining (Figs 4A, C, D, F, 5A, D, E, L, M). Dorsal: Staining of prostomium varying from few irregular stained cells to stained cells forming two bars (faint or distinct) fading into dispersed stained cells towards anterior (Figs 4A, 5A, D). Staining of caruncle varying from no staining pattern to few stained cells (Figs 4A, 5A, D). Staining of peristomium varying from few irregular stained cells (Fig. 4A) to clearly dispersed stained cells that may be concentrated along ridge of prostomium (Figs 5A, D). Chaetiger 1 to 4 varying from no stain (Fig. 4A) to irregularly stained cells (Fig. 5D) or patches of stain on both sides of caruncle (Fig. 5A), fading toward latero-ventral (Figs 5F, J, L, M). Chaetiger 5 with fewest stained cells of anterior chaetigers, varying from no (Figs 4A, 5D) to few irregular (Fig. 5A) stained cells. On chaetiger 6 to 20 th from the last chaetiger, stain varying from faint (Fig. 4D) to distinct (Fig. 5E), patches of stained cells on both sides of centre intensifying towards posterior; 8 th to 2 nd from the last chaetiger varying from no staining pattern to stained cells forming faint (Fig. 4G) or distinct patches (Figs 5H, N) towards posterior on both sides of centre; last chaetiger without staining pattern (Figs 4G, 5H, N). Except for chaetigers 1 to 4, no lateral staining pattern (Fig. 4C, F, 5L, M). Ventral: Staining of peristomium and chaetigers 1 to 5 varying from no staining pattern (Fig. 4B) to irregular stained cells on the side and across the venter on chaetigers 1 and 2, decreasing in density posteriorly (Figs 5F, J). Chaetigers 6 to 14 with stained cells forming wide bands across the anterior part of chaetiger (Figs 4B, E, 5F, G, J). Chaetigers 15 to 18 stained cells may form a wide (Fig. 5F) to a thin (Fig. 5G) band across the anterior part of chaetiger or be absent (Fig. 5K); from Chaetiger 19 to last chaetiger without staining pattern (Fig. 4H). Posterior: Pygidium with distinct stained cells covering entire surface, except along edge around anus and outermost edge of disc (Figs 4G, H, 5H, N). Remarks. Specimens of P. websteri from South Africa conform to the morphology of the lectotype (Loosanoff & Engle 1943; Radashevsky 1999) (Fig. 7) and descriptions of conspecifics found globally (Blake 1969, 1971; Foster 1971; Blake & Kudenov 1978; Handley & Bergquist 1997; Sato-Okoshi 1999; Surugiu 2005, 2012; Sato- Okoshi et al. 2008; Bonifácio 2009; Read 2010; Sato-Okoshi & Abe 2013; Barros et al. 2017; Ye et al. 2017; Rice et al. 2018). Some variation present for the branchiae, pigmentation patterns and spines on chaetiger 5, is within the ranges reported for the species or may be the result of wear and tear or preservation. Branchiae for South African specimens occurred on approximately 50 % of chaetigers, slightly less than the 60 – 80 % of the body length described elsewhere (Loosanoff & Engle 1943; Blake & Kudenov 1978; Radashevsky 1999; Surugiu 2005, 2012; Sato-Okoshi & Abe 2013; Ye et al. 2017). Continuous black pigmentation lines adjacent to the food groove on the palps were observed for most South African specimens (Fig. 5B, C), but absent from some paratype material (Radashevsky 1999), probably as a consequence of fading in preserved specimens (Read 2010). Similar pigmentation fading can also be seen on the palps for some preserved specimens from South Africa (Fig. 5C) and USA (Rice et al. 2018), where sections of the black line are lighter, making them seem non-continuous if not carefully examined (see also Waser et al. 2020). Sato-Okoshi & Abe (2013) found that while some live specimens from Japan had continuous black lines on the palps, others had discontinuous black pigmentation. It is uncertain whether this is intraspecific variation or a result of fading due to age of the worm, as in certain parts of the palp pigmentation appeared faded. South African specimens have a pronounced flange on the falcate spines with pennoned companion chaetae on chaetiger 5 (Fig. 6A). Wear and orientation of the falcate spines on chaetiger 5 may give the appearance of a tooth and/ or a sheath (Read 2010) instead of only a flange as in South African specimens and most other descriptions (Blake & Kudenov 1978; Radashevsky 1999; Sato-Okoshi 1999; Surugiu 2005, 2012; Bonifácio 2009; Read 2010; Barros et al. 2017; Rice et al. 2018; Martinelli et al. 2020). With age, pennoned companion chaetae on chaetiger 5 may appear frayed or hastate (Read 2010), as seen for South African specimens. Distribution. Namibia: Swakopmund; South Africa: Paternoster and Kleinzee on the west coast (Simon 2015; Williams 2015); and Port Elizabeth, Nelson Mandela Bay on the east coast (Simon 2011; this study). Globally: USA: West coast: Washington State (Martinelli et al. 2020) and Gulf of California in Mexico (Blake 1969, 1971; Foster 1971); East coast: Maine, Massachusetts, Maryland (Blake 1969, 1971; Foster 1971; Rice et al. 2018) and New York (Martinelli et al. 2020); Gulf coast: Alabama (Rice et al. 2018) and the Gulf of Mexico (Blake 1969, 1971; Foster 1971); Australia (Blake & Kudenov 1978; Sato-Okoshi & Abe 2013), Canada (Blake 1969, 1971; Foster 1971), China (Sato-Okoshi et al. 2013; Ye et al. 2017), Japan (Sato-Okoshi 1999; Sato-Okoshi & Abe 2012, 2013), Hawaii (Rice et al. 2018), New Zealand (Read 2010), Romania, Ukraine (Surugiu 2005, 2012) and the Wadden Sea (Waser et al. 2020). Ecology. In South Africa, P. websteri is currently only found boring into shells of cultured oysters, C. gigas (Simon & Sato-Okoshi 2015; Williams 2015; Williams et al. 2017). P. websteri is a pest of commercial molluscs in most locations where it has been reported (Simon & Sato-Okoshi 2015), and also abundant in intertidal and shallow waters (Blake & Evans 1973). Polydora websteri is not host specific and creates U-shaped burrows that induce the formation of mud-blisters by molluscs such as Argopecten irradians Lamarck, 1819 (Lauckner 1983), Crassostrea cf. brasiliana Lamarck, 1819 (Barros et al. 2017; Bonifácio 2009), C. gigas (Read 2010; Rice et al. 2018), Crassostrea hongkongensis Lam & Morton, 2003 (Ye et al. 2017), Cras

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Other · Consensus signal: Other
Teacher disagreement score0.013
Threshold uncertainty score0.043

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0020.001
Scholarly communication0.0010.002
Open science0.0000.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0130.004

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.034
GPT teacher head0.226
Teacher spread0.192 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Published2021
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