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Record W6893988612 · doi:10.5281/zenodo.7221918

Peromyscus keeni

2019· article· yi· W6893988612 on OpenAlexaboutno aff

Bibliographic record

VenueZenodo (CERN European Organization for Nuclear Research) · 2019
Typearticle
Languageyi
FieldBiochemistry, Genetics and Molecular Biology
TopicVenomous Animal Envenomation and Studies
Canadian institutionsnot available
Fundersnot available
KeywordsPeromyscusDeer mouseSubspeciesQueen (butterfly)

Abstract

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Peromyscus keeni (Rhoads) Sitomys keeni Rhoads, 1894:258. Sitomys macrorhinus Rhoads, 1894:259. Peromyscus keeni Bangs, 1897:75. Peromyscus sitkensis Merriam, 1897:223. Peromyscus oreas Bangs, 1898b:84. Peromyscus prevostensis Osgood, 1901b:29. Peromyscus hylaeus Osgood, 1908:141. Peromyscus maniculatus oreas Osgood, 1909:51. Peromyscus maniculatus hylaeus Osgood, 1909:53. Peromyscus maniculatus keeni Osgood, 1909:55. Peromyscus maniculatus algidus Osgood, 1909:56. Peromyscus maniculatus macrorhinus Osgood, 1909:57. Peromyscus sitkensis prevostensis Osgood, 1909:102. Peromyscus maniculatus interdictus Anderson, 1932:110. Peromyscus sitkensis oceanicus Cowan, 1935:432. Peromyscus sitkensis isolatus Cowan, 1935:434. Peromyscus maniculatus prevostensis McCabe and Cowan, 1945:187 Peromyscus maniculatus isolatus McCabe and Cowan, 1945:194. Peromyscus maniculatus cancrivorus McCabe and Cowan, 1945:195. Peromyscus maniculatus doylei McCabe and Cowan, 1945:196 Peromyscus maniculatus rubiventer McCabe and Cowan, 1945:196 Peromyscus maniculatus balaclavae McCabe and Cowan, 1945:197 Peromyscus maniculatus maritimus McCabe and Cowan, 1945:199 Peromyscus maniculatus pluvialis McCabe and Cowan, 1945:199 Peromyscus maniculatus triangularis Guiguet, 1955:B69. Peromyscus maniculatus sartinensis Guiguet, 1955:B69. Peromyscus maniculatus beresfordi Guiguet, 1955:B71. Peromyscus maniculatus carli Guiguet, 1955:B72. Holotype.— Academy of Natural Sciences, Philadelphia (catalog number 7,768); young adult, male, preserved as alcohol except skull. Original number 768 from the collection of S. N. Rhoads. Type locality.— Canada: British Columbia; Masset, Graham Island, Queen Charlotte Islands; collected 1892 by J. H. Keen. Subspecies.— Although we were not able to examine many of the subspecies that potentially are referable to P. keeni, based on the results of Hogan et al. (1993) and those presented herein, as well as distributional data presented in Hall (1981) we tentatively assign the following 22 subspecies recognized to P. keeni: algides, angustus, balaclavae, beresfordi, cancrivorus, carli, doylei, georgiensis, hylaeus, interdictus, insolatus, keeni, macrorhinus, maritimus, oreas, oceanicus, pluvialis, prevostensis, rubiventer, sartinensis, sitkensis, and triangularis. Diagnosis.— Sides russet with darker brown on upperparts, underparts white. Skull heavy for the genus; nasal and rostrum short and thick; posterior nasal endings usually equaling premaxillae (Osgood 1909). Size is large for species group. Measurements obtained from Osgood (1909) and Allard and Greenbaum (1988), for several of the subspecies now assigned to P. keeni, indicate that the total length averaged 197.5 mm; (range 178–217 mm) and tail length averaged 103 mm (range 89–117 mm). Examination of Cyt b sequences obtained in this study indicated that P. keeni differs from P. sp., P. gambelii, and P. sejugis (three closely related species to P. keeni) by 4.66%, 3.71%, and 3.97% respectively. Genetic differentiation (= 0.93%) based on DNA sequences obtained from 142 individuals of P. keeni indicated a low level of genetic divergence for members of the P. maniculatus species group. This species exhibited a similar level of genetic divergence as did P. gambelii and P. labecula, two species that occupy a similar-sized geographic area. Distribution.— Occurs in the coastal regions (west of the Coastal and Cascade mountain ranges) in southernAlaska southward to central Washington (Hall 1981; Hogan et al. 1993; Gunn 1988; Gunn and Greenbaum 1986; Allard et al. 1987; Calhoun and Greenbaum 1991; Zheng et al. 2003; Lucid and Cook 2004). P. keeni also occurs on most of the islands in the Queen Charlotte Sound (coastal region of British Columbia) and the Alexander Archipelago (southwestern coast Alaska). Comparison.— A member of the P. maniculatus species group. Morphological analyses (Gunn and Greenbaum 1986) indicate that samples of P. oreas (now referred to as P. keeni) were significantly larger than P. m. austerus (now referred to as P. sonoriensis), another species that occurs in the Pacific Northwest, in three external measurements including: total length, length of tail, and length of hindfoot (P. keeni; = 199.4 mm, 106.5 mm, and 22.5 mm and P. sonoriensis; = 175.7 mm, 85.4 mm, and 20.7 mm, respectively). Similarly, Allard et al. (1987) indicated that 21 of 28 samples of P. oreas (now referred to as P. keeni) were significantly larger than those of P. m. austerus (now referred to as P. sonoriensis). In areas where P. keeni and P. maniculatus occur in sympatry, P. keeni are a habitat specialist (Songer et al. 1997) preferring a more old-growth forest habitat; whereas P. maniculatus prefer clear cut areas. Remarks.— One hundred-eighty samples examined in this study were assigned to P. keeni. Of these samples, one from the southern portion of Prince of Wales Island, was approximately 100 km from the type locality on Queen Charlotte Island. Several studies (Robbins and Baker 1981; Rogers et al. 1984; Allard et al. 1987; Gunn and Greenbaum 1986; Calhoun and Greenbaum 1991; Hogan et al. 1993; Chirhart et al. 2001, 2005; Zheng et al. 2003), based on chromosomal, allozymic, morphologic, and sequence data, support a distinction between P. keeni (formerly recognized as P. oreas and P. sitkensis) and P. sonoriensis (formerly recognized as populations of P. maniculatus). Gunn (1988), Gunn and Greenbaum (1986), and Hogan et al. (1993) reported two karyotypic groups of deermice from the Pacific northwest; a high FN 85–92 group that corresponded to P. oreas (now recognized as P. keeni) and a low FN group 74–78 that were assignable to P. maniculatus. No intermediate karyotypes were identified between these groups and individual mice with a high FN (85–92) typically possessed a large body size; whereas, mice with a low FN (74–78) typically possessed a smaller body size. As a result of these studies, populations formerly assigned to P. oreas and P. sitkensis were subsumed into P. keeni (Hogan et al. 1993). Divergence estimates obtained herein suggested that P. keeni diverged, perhaps (weakly supported node), from the common ancestor of the unnamed species (P. sp. from the Yukon region) approximately 1.12 mya. Further it appears that the P. keeni / P. sp. lineage diverged from the other extreme western forms formerly assigned to P. maniculatus (P. gambelii and P. sejugis approximately 1.55 mya.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.034
Threshold uncertainty score0.114

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0010.001
Scholarly communication0.0000.001
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0340.012

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.019
GPT teacher head0.230
Teacher spread0.210 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Published2019
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