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Record W6894106361 · doi:10.5281/zenodo.6926051

Querciphoma styphnolobii H. X. Gao & Z. X. Zhu 2022, sp. nov.

2022· article· en· W6894106361 on OpenAlexaff

Bibliographic record

VenueZenodo (CERN European Organization for Nuclear Research) · 2022
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant Pathogens and Fungal Diseases
Canadian institutionsMinistry of Education and Child Care
Fundersnot available
KeywordsAscocarpConidiumSetaGenusLayer (electronics)

Abstract

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Querciphoma styphnolobii H.X. Gao & Z.X. Zhu, sp. nov. (Figs. 2–3) MycoBank no.: MB 840304. Etymology:— The epithet “styphnolobii” refers to the host plant genus Styphnolobium. Type: — CHINA, Henan Province, Xingyang city, 34°49′N, 113°21′E, 130 m elevation, on the bark of Styphnolobium japonicum, 6 Jun 2020, Hanxing Gao 1367, HMJAU 34703 (holotype!), HMJAU 35100 (culture collection). Diagnosis:— Querciphoma styphnolobii is characterized by eustromatic, pycnidial conidiomata with scleroplectenchymatous cell type in the peridium, smooth, hyaline, cylindrical conidia with one middle constricted septum and muriform ascospores. Description:—Sexual morph: Ascomata solitary, gregarious, semi-immersed to erumpent through host tissue, becoming superficial, globose, rough or hairy, dark brown to black, ostiolate, with short papilla, 100–200 × 90–190 µm (av. = 140 × 130 µm, n = 24). Ostiole central, smooth, with ostiolar canal filled with hyaline cells, 40–50 µm long, 20–30 µm diam. (av. = 45 × 25 µm, n = 10). Setae septate, brown, 42–60 µm (av. = 56 µm, n = 20). Peridium 20–60 µm (av. = 40 µm, n = 20) wide at the base, 18–50 µm (av. = 35 µm, n = 20) wide at the sides, comprising 3–6 layers, with outer layer heavily pigmented, blackish to dark brown, thick-walled, scleroplectenchymatous cells of textura angularis, cells towards the inside lighter, with inner layer composed 3–4 layers, hyaline, flattened, thin-walled cells of textura angularis, (6.5–)9.0–34(–38) × (5.0–)6.0–15 μm (av. = 18 × 9.0 μm, n = 35). Hamathecium composed of numerous, dense, cylindrical to filiform, long, cellular pseudoparaphyses, embedded in mucilage, rarely branched, septate, 1–2.5 μm wide. Asci 8-spored, bitunicate, fissitunicate, fusiform, short-pedicellate, rounded at apex with a minute ocular chamber, 86–138 × 18–21 µm (av. = 115 × 19 µm, n = 22). Ascospores biseriate, mostly ellipsoidal, muriform, 3−6 transversely eusepta, with one vertical septum, constricted at the middle septum, conical and narrow at the ends, surrounded by a mucilaginous sheath, initially hyaline, becoming light brown at maturity, 18–24 × 8–11 µm (av. = 22 × 9 µm, n = 50). Asexual morph: Coelomycetous structures produced in culture. Conidiomata pycnidial, eustromatic, solitary, sometimes aggregated, globose to subglobose, light brown, uni- to multi-locular, with 1–3 papillate ostioles, superficial or immersed in the agar, 110–260 µm (av. = 170 µm, n = 32) wide. Conidiomata wall scleroplectenchyma, comprising of 3–4 layers of textura angularis, outermost layer brown, inner layer hyaline, 4.0–9.0 × 2.5–6.5 µm (av. = 6.0 × 5.0 µm, n = 53). Setae brown, septate, 25–87 µm (av. = 64 µm, n=20). Conidiophore cylindrical to phialide-like, hyaline, arising from the inner layers of conidioma. Conidiogenous cells holoblastic, discrete, or integrated with septate, hyaline. Conidia cylindrical, hyaline, 1(–3) septates, the septa in the middle constricted, with 2 large guttules or several tiny guttules, 12–19 × 4.0–7.0 µm (av. = 16 × 6.0 µm, n = 77). Culture characteristics: Colony slow-growing, optimum growth at 25°C, not growing at 35°C on all media, reaching 40 mm on PDA, 55 mm on CMD, 58 mm on OA after 2 weeks at 25°C. Colonies circular, dense, slightly raised to convex, or dome-shaped, dull, surface slightly rough with small turfs, velvety to floccose; colony dark-green at the margin, grey-greenish at the center on CMD and OA, almost dark on PDA. Conidiomata only formed on OA. Distribution and Habitat:— China, on Styphnolobium japonicum. Discussion:— Querciphoma styphnolobii is compatible with the generic concept of Querciphoma in having eustromatic, uni- to multi-locular, pycnidial conidiomata with septate setae and a thick-walled peridium of brown to dark brown or reddish-brown, scleroplectenchymatous cells. Morphologically, the type species, Querciphoma minuta has smaller (Q. minuta: (3.5–)4–5(–6) × 3(–3.5) µm vs. Q. styphnolobii: 12.3–19 × 4.4–7.0 µm), broadly ellipsoidal, aseptate, and brown conidia (Crous & Groenewald 2017). Q. styphnolobii is easily distinguished by its smooth, hyaline, cylindrical conidia with mostly one middle constricted septum. Querciphoma styphnolobii differs from Alloleptosphaeria, Pseudoleptosphaeria and Subplenodomus in the structure of the conidiomata wall (scleroplectenchyma vs. pseudoparenchymatous) (Ariyawansa et al. 2015, Hongsanan et al. 2020). Querciphoma styphnolobii shares similar pycnidial characters with Leptosphaeria sensu stricto, Plenodomus, and Paraleptosphaeria in the scleroplectenchymatous cell type in the peridium (de Gruyter et al. 2013, Ariyawansa et al. 2015, Wanasinghe et al. 2016, Aiello et al. 2020, Phukhamsakda et al. 2020). However, Q. styphnolobii has mostly 1-septate conidia rather than aseptate conidia (Ariyawansa et al. 2015, Hongsanan et al. 2020). Based on morphology, Querciphoma styphnolobii is most similar to Chaetoplea with similar black perithecial ascomata with scleroplectenchymatous cells, pycnidial conidiomata with oblong to ellipsoidal, smooth-walled conidia. However, Chaetoplea produced brown conidia and fusiform to ellipsoidal ascospores with only transverse septa (Phookamsak et al. 2014), while Q. styphnolobii can be easily distinguished by hyaline conidia with one middle constricted septum and muriform ascospores. Querciphoma styphnolobii also closely related to Sclerenchymomyces that was introduced by Phukhamsakda et al. (2020) which includes two species. Sclerenchymomyces jonesii (Wanasinghe, Camporesi & K.D. Hyde) Phukhams. & K.D. Hyde (2020: 43) shares similarities with Q. styphnolobii in having globose, rough or hairy ascomata, cylindrical, short-pedicellate asci, and overlapping uniseriate, ellipsoidal, muriform ascospores with conical and narrow at the ends, but the former has different aseptate and smaller conidia (3–4 × 2–2.5 μm versus 12–19 × 4.0–7.0 µm) (Wanasinghe et al. 2016, Phukhamsakda et al. 2020). In addition, Sclerenchymomyces clematidis Phukhams. & K.D. Hyde (2020: 41) obviously differs from Q. styphnolobii in broad cylindrical to oblong, and yellowish conidia with 3 septa (Phukhamsakda et al. 2020). Thirteen genera of Leptosphaeriaceae were included in our phylogenetic tree (Figure. 1) except Chaetoplea whose sequences are unavailable. Querciphoma styphnolobii is closely related to Q. minuta, and formed an independent lineage with high statistical support (MPBP/MLBP/BIPP = 100/100/1). In a BLASTn search of GenBank, the ITS sequence of Q. styphnolobii was 95.8% (100% query coverage) similar to Q. minuta (LG1401-MS6E) with 24 nucleotide differences from 572 base pairs (4.2%), while the LSU and SSU sequences showed 99.54% (with 96% query coverage) and 100% (with 100% query coverage) similarity to Q. minuta (CBS 105.91), respectively. Sequence analyses also confirmed our identification. Combined morphological and phylogenetic analyses confirmed our new species Q. styphnolobii as a distinct member of the genus Querciphoma. With the discovery of new species, the sexual morph of Querciphoma were supplemented. This paper also contributes to a more comprehensive update and improved identification of Querciphoma based on our collection.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.018
Threshold uncertainty score0.035

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0020.002
Science and technology studies0.0010.001
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0030.003

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.220
Teacher spread0.203 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Published2022
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