Additional file 3 of A 3D human iPSC-derived multi-cell type neurosphere system to model cellular responses to chronic amyloidosis
Bibliographic record
Abstract
Supplementary Material 3: Figure S3: hiMG differentiation timeline shows a gradual increase in IBA1 expression. A: hiMG were plated on coverslips and fixed at different time points during differentiation. Immunofluorescence for IBA1is detectable at all time points. Co-staining with tomato lectin- 488 confirms that lectin can be used to label hiMG in vitro. B: Western blot for IBA1 confirms stable expression in hiMG up to at least day 21. C: Stimulation of hiMG with LPS for 24 h results in significant TNFα and IL1β release confirming their capacity to react to proinflammatory stimuli. D: Full length blots for GAPDH, IBA1, β-actin, Il1β and TNFα. E: All individual blots for Il1β and TNFα used for the quantification in panel C
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How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.002 | 0.011 |
| Meta-epidemiology (narrow) | 0.001 | 0.001 |
| Meta-epidemiology (broad) | 0.001 | 0.001 |
| Bibliometrics | 0.002 | 0.002 |
| Science and technology studies | 0.001 | 0.000 |
| Scholarly communication | 0.002 | 0.001 |
| Open science | 0.002 | 0.001 |
| Research integrity | 0.001 | 0.001 |
| Insufficient payload (model declined to judge) | 0.866 | 0.268 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".