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Heterogeneity between Two α Subunits of α<sub>2</sub>β<sub>2</sub> Human Hemoglobin and O<sub>2</sub> Binding Properties: Raman, <sup>1</sup>H Nuclear Magnetic Resonance, and Terahertz Spectra

2017· article· en· W6903196297 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

aboutThe title or abstract carries a Canadian signal from the geographic lexicon.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenueFigshare · 2017
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicHemoglobin structure and function
Canadian institutionsnot available
Fundersnot available
KeywordsTetramerProtein quaternary structureProtein subunitHemoglobinSpectral lineRaman spectroscopy

Abstract

fetched live from OpenAlex

Following\na previous detailed investigation of the β subunit\nof α<sub>2</sub>β<sub>2</sub> human adult hemoglobin (Hb\nA), this study focuses on the α subunit by using three natural\nvalency hybrid α­(Fe<sup>2+</sup>-deoxy/O<sub>2</sub>)­β­(Fe<sup>3+</sup>) hemoglobin M (Hb M) in which O<sub>2</sub> cannot bind\nto the β subunit: Hb M Hyde Park (β92His → Tyr),\nHb M Saskatoon (β63His → Tyr), and Hb M Milwaukee (β67Val\n→ Glu). In contrast with the β subunit that exhibited\na clear correlation between O<sub>2</sub> affinity and Fe<sup>2+</sup>–His stretching frequencies, the Fe<sup>2+</sup>–His\nstretching mode of the α subunit gave two Raman bands only in\nthe T quaternary structure. This means the presence of two tertiary\nstructures in α subunits of the α<sub>2</sub>β<sub>2</sub> tetramer with T structure, and the two structures seemed\nto be nondynamical as judged from terahertz absorption spectra in\nthe 5–30 cm<sup>–1</sup> region of Hb M Milwaukee, α­(Fe<sup>2+</sup>-deoxy)­β­(Fe<sup>3+</sup>). This kind of heterogeneity\nof α subunits was noticed in the reported spectra of a metal\nhybrid Hb A like α­(Fe<sup>2+</sup>-deoxy)­β­(Co<sup>2+</sup>) and, therefore, seems to be universal among α subunits of\nHb A. Unexpectedly, the two Fe–His frequencies were hardly\nchanged with a large alteration of O<sub>2</sub> affinity by pH change,\nsuggesting no correlation of frequency with O<sub>2</sub> affinity\nfor the α subunit. Instead, a new Fe<sup>2+</sup>–His\nband corresponding to the R quaternary structure appeared at a higher\nfrequency and was intensified as the O<sub>2</sub> affinity increased.\nThe high-frequency counterpart was also observed for a partially O<sub>2</sub>-bound form, α­(Fe<sup>2+</sup>-deoxy)­α­(Fe<sup>2+</sup>-O<sub>2</sub>)­β­(Fe<sup>3+</sup>)­β­(Fe<sup>3+</sup>), of the present Hb M, consistent with our previous finding that\nbinding of O<sub>2</sub> to one α subunit of T structure α<sub>2</sub>β<sub>2</sub> tetramer changes the other α subunit\nto the R structure.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Science and technology studies, Scholarly communication, Research integrity, Insufficient payload (model declined to judge)
Consensus categoriesMeta-epidemiology (narrow), Insufficient payload (model declined to judge)
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.330
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0040.004
Meta-epidemiology (broad)0.0040.001
Bibliometrics0.0010.001
Science and technology studies0.0030.001
Scholarly communication0.0020.001
Open science0.0030.003
Research integrity0.0030.002
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.024
GPT teacher head0.244
Teacher spread0.220 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it