Clusters of PaBV-4 sequences from captive psittacines are not associated with regional origin or host species.
Bibliographic record
Abstract
<p>Partial PaBV-4 N gene sequences (326 bp) were analysed using Neighbor-Joining algorithm and Jukes-Cantor distance model in Geneious R8. The tree was rooted with <i>Bornaviridae</i> references sequences (not shown; see <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0160936#pone.0160936.g001" target="_blank">Fig 1</a>). Values at branches represent support in 1,000 bootstrap replicates. Only bootstrap values ≥70 at major branches are shown. Nodes with bootstrap support of ≥90 in additionally performed ML analysis are indicated by asterisks. Sequences depicted in bold were generated during this study. Sequences from African grey parrots (<i>Psittacus erithacus</i>) are underlined. (◇) flock A, Germany, 2015; (<b>★</b>) flock B, Canada, 2009 [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0160936#pone.0160936.ref043" target="_blank">43</a>]; (■) flock C, Germany, 2012.</p>
Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.
How this classification was reachedexpand
Full frame distilled prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.
Codex and Gemma teacher scores by category
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.000 | 0.001 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.001 | 0.000 |
| Bibliometrics | 0.000 | 0.000 |
| Science and technology studies | 0.000 | 0.000 |
| Scholarly communication | 0.000 | 0.000 |
| Open science | 0.001 | 0.000 |
| Research integrity | 0.001 | 0.000 |
| Insufficient payload (model declined to judge) | 0.458 | 0.001 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one teacher head, not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".