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GENOTYPING OF PSEUDOHERMAPHRODITE POLAR BEARS IN NUNAVUT AND ADVANCES IN DNA SEXING TECHNIQUES

2005· article· en· W6906372356 on OpenAlexaboutno aff

Bibliographic record

VenueBioOne Complete (BioOne) · 2005
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic and Clinical Aspects of Sex Determination and Chromosomal Abnormalities
Canadian institutionsnot available
Fundersnot available
KeywordsGenotypingPopulationAmelogeninPolarPolar bodySexing

Abstract

fetched live from OpenAlex

Abstract Female pseudohermaphroditism is characterized by gonads consistent with chromosomal sex combined with ambiguous, masculinized external genitalia. Recognized in many mammals, this condition results from fetal exposure to androgens that can be embryonic, maternal, or environmental in origin. Female pseudohermaphrodite black and brown bears (Ursus americanus and U. arctos) from Alberta, Canada, and polar bears (U. maritimus) from Svalbard, Norway, have been identified. Recent population surveys in Nunavut, Canada, led to the discovery of 11 additional female pseudohermaphrodite polar bears. Each bear was screened for the presence of sex-determining region-Y (Sry) and amelogenin-Y (AMELY) genes as indicators of Y-chromosome DNA. One bear possessed both genes, implying that trisomy or a chromosomal rearrangement may account for her virilized phenotype. Preliminary data suggested that Sry was also present in the other 10 bears; further testing disproved that result, revealed an important source of error when using polymerase chain reaction (PCR) to screen for the Sry gene, and led to the development of new amelogenin primers that provide superior sex information for bears. Ultimately, these extensive screens also supported the conclusion that 10 of 11 morphologically abnormal individuals may possess no genuine male-specific DNA. Therefore, nongenetic mechanisms such as maternal tumors, freemartinism, or endocrinological effects of environmental contaminants may also influence the development of the female pseudohermaphrodite phenotype in Nunavut polar bears.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.185
Threshold uncertainty score0.728

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.085
GPT teacher head0.261
Teacher spread0.176 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2005
Admission routes1
Has abstractyes

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