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Record W6911883302 · doi:10.5281/zenodo.15306442

A guide to selecting high-performing antibodies for Rab13 (UniProt ID: P51153) for use in western blot, immunoprecipitation, and immunofluorescence

2025· article· en· W6911883302 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
aboutThe title or abstract carries a Canadian signal from the geographic lexicon.

Bibliographic record

VenueZenodo (CERN European Organization for Nuclear Research) · 2025
Typearticle
Languageen
FieldSocial Sciences
TopicHumanities and Social Sciences
Canadian institutionsMontreal Neurological Institute and Hospital
Fundersnot available
KeywordsImmunofluorescenceAntibodyWestern blotGene knockdownBlotImmunoprecipitationGenomeCell culture

Abstract

fetched live from OpenAlex

This report presents a guide to selecting high-quality commercial antibodies against GTPase Rab13 in western blot using a standardized experimental protocol based on comparing read-outs in a knockout cell line and isogenic control; a knockdown cell line was also used to assess the capability of antibodies in immunoprecipitation and immunofluorescence. This work was supported by the CQDM (a grant from the Ministère de l’Économie, de l’Innovation et de l’Énergie du Québec) as well as the Government of Canada through Genome Canada, Genome Quebec, and Ontario Genomics (grant no. OGI-210).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.002
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesScience and technology studies, Scholarly communication
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.892
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0020.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0060.000
Scholarly communication0.0010.001
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.038
GPT teacher head0.317
Teacher spread0.279 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it