Bibliographic record
Abstract
A dataset containing 4233689 species occurrences available in GBIF matching the query: { "and" : [ "TaxonKey is one of (Alouatta palliata (Gray, 1849), Anoura cultrata Handley, 1960, Arctocephalus galapagoensis Heller, 1904, Ateles geoffroyi Kuhl, 1820, Bauerus dubiaquercus (Van Gelder, 1959), Bradypus variegatus Schinz, 1825, Cabassous centralis (Miller, 1899), Cebus imitator Thomas, 1903, Chironectes minimus (Zimmermann, 1780), Choloepus hoffmanni Peters, 1858, Chrotopterus auritus (Peters, 1856), Cryptotis gracilis Miller, 1911, Cryptotis merriami Choate, 1970, Cryptotis monteverdensis Woodman & Timm, 2017, Cryptotis nigrescens (J.A.Allen, 1895), Cryptotis orophila (J.A.Allen, 1895), Cuniculus paca (Linnaeus, 1766), Cyclopes dorsalis (Gray, 1865), Dasyprocta punctata Gray, 1842, Dasypterus ega (Gervais, 1856), Dasypterus intermedius (H.Allen, 1862), Diaemus youngii (Jentink, 1893), Ectophylla alba H.Allen, 1892, Eira barbara (Linnaeus, 1758), Eptesicus chiriquinus Thomas, 1920, Eumops nanus (Miller, 1900), Furipterus horrens (F.Cuvier, 1828), Glyphonycteris daviesi (Hill, 1964), Glyphonycteris sylvestris Thomas, 1896, Orthogeomys cavator (Bangs, 1902), Orthogeomys cherriei (J.A.Allen, 1893), Heteromys nubicolens Anderson, 2006, Heteromys oresterus Harris, 1932, Ichthyomys tweedii Anthony, 1921, Lasiurus castaneus Handley, 1960, Lasiurus frantzii (Peters, 1871), Leopardus pardalis (Linnaeus, 1758), Leopardus tigrinus (Schreber, 1775), Leopardus wiedii (Schinz, 1821), Liomys salvini (Thomas, 1893), Lonchophylla concava Goldman, 1914, Lontra longicaudis (Olfers, 1818), Micoureus alstoni (J.A.Allen, 1900), Marmosa zeledoni Goldman, 1911, Mazama temama (Kerr, 1792), Melanomys chrysomelas (Goldman, 1918), Metachirus nudicaudatus (É.Geoffroy Saint-Hilaire, 1803), Mimon cozumelae Goldman, 1914, Myotis oxyotus (Peters, 1867), Myotis pilosatibialis LaVal, 1973, Nasua narica (Linnaeus, 1766), Natalus lanatus Tejedor, 2005, Nephelomys devius (Bangs, 1902), Odocoileus virginianus (Zimmermann, 1780), Oecomys trinitatis (J.A.Allen & Chapman, 1893), Oligoryzomys vegetus (Bangs, 1902), Orthogeomys heterodus (Peters, 1865), Orthogeomys underwoodi (Osgood, 1931), Panthera onca (Linnaeus, 1758), Peromyscus nudipes J.A.Allen, 1891, Phylloderma stenops Peters, 1865, Potos flavus (Schreber, 1774), Pteronotus fulvus (Thomas, 1892), Puma concolor (Linnaeus, 1771), Puma yagouaroundi (É.Geoffroy Saint-Hilaire, 1803), Reithrodontomys brevirostris Goodwin, 1943, Reithrodontomys creper Bangs, 1902, Reithrodontomys garichensis (Enders & Pearson, 1940), Reithrodontomys musseri Gardner & Carleton, 2009, Reithrodontomys paradoxus Jones & Genoways, 1970, Reithrodontomys rodriguezi Goodwin, 1943, Rheomys raptor Goldman, 1912, Rheomys underwoodi Thomas, 1906, Saimiri oerstedii (Reinhardt, 1872), Sciurus deppei Peters, 1863, Scotinomys xerampelinus (Bangs, 1902), Speothos venaticus (Lund, 1842), Sphiggurus mexicanus (Kerr, 1792), Sturnira burtonlimi Velazco & Patterson, 2014, Sturnira mordax (Goodwin, 1938), Sylvilagus dicei Harris, 1932, Syntheosciurus brochus Bangs, 1902, Tamandua mexicana (Saussure, 1860), Tanyuromys aphrastus Harris, 1932, Tapirella bairdii (Gill, 1865), Tayassu pecari (Link, 1795), Pecari tajacu (Linnaeus, 1758), Thyroptera tricolor Spix, 1823, Transandinomys talamancae (J.A.Allen, 1891), Trinycteris nicefori (Sanborn, 1949), Tylomys watsoni Thomas, 1899, Uroderma convexum Lyon, 1902, Vampyriscus nymphaea (Thomas, 1909), Vampyrum spectrum (Linnaeus, 1758), Zalophus wollebaeki Sivertsen, 1953, Acanthidops bairdi Ridgway, 1882, Accipiter bicolor (Vieillot, 1817), Accipiter cooperii (Bonaparte, 1828), Accipiter poliogaster (Temminck, 1824), Accipiter striatus Vieillot, 1808, Accipiter superciliosus (Linnaeus, 1766), Aegolius ridgwayi (Alfaro, 1905), Agamia agami (Gmelin, 1789), Aimophila rufescens (Swainson, 1827), Amaurolimnas concolor (Gosse, 1847), Amazilia boucardi (Mulsant, 1877), Amazilia rutila (Delattre, 1843), Amazilia tzacatl (de la Llave, 1833), Amazona albifrons (Sparrman, 1788), Amazona auropalliata (Lesson, 1842), Amazona autumnalis (Linnaeus, 1758), Amazona farinosa (Boddaert, 1783), Amazona ochrocephala (Gmelin, 1788), Anthracothorax prevostii (R.Lesson, 1832), Anthracothorax veraguensis Reichenbach, 1855, Antrostomus carolinensis (J.F.Gmelin, 1789), Antrostomus saturatus Salvin, 1870, Antrostomus vociferus (A.Wilson, 1812), Aphanotriccus capitalis (Salvin, 1865), Ara ambiguus (Bechstein, 1811), Ara macao (Linnaeus, 1758), Aramides axillaris Lawrence, 1863, Aramus guarauna (Linnaeus, 1766), Aratinga canicularis (Linnaeus, 1758), Aratinga pertinax (Linnaeus, 1758), Archilochus colubris (Linnaeus, 1758), Arremon costaricensis (Bangs, 1907), Arremon crassirostris (Cassin, 1865), Asio flammeus (Pontoppidan, 1763), Athene cunicularia (Molina, 1782), Automolus exsertus Bangs, 1901, Bangsia arcaei (P.L.Sclater & Salvin, 1869), Basileuterus melanogenys S.F.Baird, 1865, Basileuterus melanotis Lawrence, 1868, Bolborhynchus lineola (Cassin, 1853), Botaurus pinnatus (Wagler, 1829), Brotogeris jugularis (Statius Muller, 1776), Bubo virginianus (J.F.Gmelin, 1788), Burhinus bistriatus (Wagler, 1829), Busarellus nigricollis (Latham, 1790), Buteo albonotatus Kaup, 1847, Buteo brachyurus Vieillot, 1816, Buteo jamaicensis (Gmelin, 1788), Buteo platypterus (Vieillot, 1823), Buteo swainsoni Bonaparte, 1838, Buteogallus anthracinus (Deppe, 1830), Buteogallus meridionalis (Latham, 1790), Harpyhaliaetus solitarius (Tschudi, 1844), Buteogallus urubitinga (Gmelin, 1788), Cairina moschata (Linnaeus, 1758), Calidris canutus (Linnaeus, 1758), Calidris ferruginea (Pontoppidan, 1763), Calidris pusilla (Linnaeus, 1766), Calidris subruficollis (Vieillot, 1819), Calliphlox bryantae (Lawrence, 1867), Calocitta formosa (Swainson, 1827), Campylopterus hemileucurus (Deppe, 1830), Cantorchilus modestus (Cabanis, 1861), Cantorchilus semibadius (Salvin, 1870), Cantorchilus thoracicus (Salvin, 1865), Cantorchilus modestus (Cabanis, 1861), Caracara plancus (J.F.Miller, 1777), Carpodectes antoniae Ridgway, 1884, Carpodectes nitidus Salvin, 1865, Cathartes burrovianus Cassin, 1845, Catharus gracilirostris Salvin, 1865, Cephalopterus glabricollis Gould, 1851, Chaetura fumosa Salvin, 1870, Chaetura pelagica (Linnaeus, 1758), Chalybura urochrysia (Gould, 1861), Chamaepetes unicolor Salvin, 1867, Charadrius melodus Ord, 1824, Charadrius nivosus (Cassin, 1858), Charadrius vociferus Linnaeus, 1758, Chiroxiphia lanceolata (Wagler, 1830), Chloroceryle inda (Linnaeus, 1766), Chlorophonia callophrys (Cabanis, 1861), Chlorospingus pileatus Salvin, 1865, Chlorostilbon assimilis Lawrence, 1861, Chondrohierax uncinatus (Temminck, 1822), Chrysothlypis chrysomelas (P.L.Sclater & Salvin, 1869), Circus cyaneus (Linnaeus, 1766), Cistothorus platensis (Latham, 1790), Automolus rubiginosus (P.L.Sclater, 1857), Coccyzus ferrugineus Gould, 1843, Coccyzus minor (Gmelin, 1788), Colibri delphinae (R.Lesson, 1839), Contopus cooperi (Nuttall, 1831), Contopus lugubris Lawrence, 1865, Contopus ochraceus P.L.Sclater & Salvin, 1869, Cotinga ridgwayi Ridgway, 1887, Crax rubra Linnaeus, 1758, Crypturellus boucardi (P.L.Sclater, 1860), Cyanolyca argentigula (Lawrence, 1875), Cypseloides cherriei Ridgway, 1893, Cypseloides niger (J.F.Gmelin, 1789), Dendrocygna autumnalis (Linnaeus, 1758), Dendrocygna bicolor (Vieillot, 1816), Dendrocygna viduata (Linnaeus, 1766), Diglossa plumbea Cabanis, 1861, Discosura conversii (Bourcier & Mulsant, 1846), Doryfera ludovicae (Bourcier & Mulsant, 1847), Dysithamnus striaticeps Lawrence, 1865, Egretta rufescens (Gmelin, 1789), Elanoides forficatus (Linnaeus, 1758), Elanus leucurus (Vieillot, 1818), Electron carinatum (Du Bus de Gisignies, 1847), Emberizoides herbicola (Vieillot, 1817), Empidonax albigularis P.L.Sclater & Salvin, 1859, Empidonax atriceps Salvin, 1870, Eugenes spectabilis (Lawrence, 1867), Eupherusa eximia (Delattre, 1843), Eupherusa nigriventris Lawrence, 1868, Euphonia anneae Cassin, 1865, Euphonia elegantissima (Bonaparte, 1838), Euphonia imitans (Hellmayr, 1936), Euphonia luteicapilla (Cabanis, 1861), Eurypyga helias (Pallas, 1781), Eutoxeres aquila (Bourcier, 1847), Falco columbarius Linnaeus, 1758, Falco deiroleucus Temminck, 1825, Falco femoralis Temminck, 1822, Falco peregrinus Tunstall, 1771, Falco rufigularis Daudin, 1800, Falco sparverius Linnaeus, 1758, Florisuga mellivora (Linnaeus, 1758), Gampsonyx swainsonii Vigors, 1825, Geothlypis aequinoctialis (J.F.Gmelin, 1789), Geranospiza caerulescens (Vieillot, 1817), Glaucidium brasilianum (J.F.Gmelin, 1788), Glaucidium costaricanum L.Kelso, 1937, Glaucidium griseiceps Sharpe, 1875, Glaucis aeneus Lawrence, 1868, Grallaricula flavirostris (P.L.Sclater, 1858), Habia atrimaxillaris (Dwight & Griscom, 1924), Harpagus bidentatus (Latham, 1790), Harpia harpyja (Linnaeus, 1758), Heliodoxa jacula Gould, 1850, Heliomaster constantii (Delattre, 1843), Heliomaster longirostris (Audebert & Vieillot, 1801), Heliornis fulica (Boddaert, 1783), Heliothryx barroti (Bourcier, 1843), Herpetotheres cachinnans (Linnaeus, 1758), Heterospingus rubrifrons (Lawrence, 1865), Hylopezus dives (Salvin, 1865), Ibycter americanus (Boddaert, 1783), Icterus mesomelas (Wagler, 1829), Icterus pectoralis (Wagler, 1829), Ictinia mississippiensis (A.Wilson, 1811), Ictinia plumbea (Gmelin, 1788), Ixobrychus exilis (Gmelin, 1789), Jabiru mycteria (Lichtenstein, 1819), Jacamerops aureus (P.L.S.Müller, 1776), Junco vulcani (Boucard, 1878), Klais guimeti (Bourcier, 1843), Lampornis calolaemus (Salvin, 1865), Lampornis castaneoventris (Gould, 1851), Lampornis hemileucus (Salvin, 1865), Lanio leucothorax Salvin, 1865, Laterallus jamaicensis (Gmelin, 1789), Leptodon cayanensis (Latham, 1790), Leucopternis semiplumbeus Lawrence, 1861, Lophornis adorabilis Salvin, 1870, Lophornis delattrei (R.Lesson, 1839), Lophornis helenae (Delattre, 1843), Lophostrix cristata (Daudin, 1
Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.
How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.001 | 0.006 |
| Meta-epidemiology (narrow) | 0.002 | 0.001 |
| Meta-epidemiology (broad) | 0.002 | 0.002 |
| Bibliometrics | 0.007 | 0.011 |
| Science and technology studies | 0.001 | 0.000 |
| Scholarly communication | 0.004 | 0.004 |
| Open science | 0.003 | 0.004 |
| Research integrity | 0.003 | 0.002 |
| Insufficient payload (model declined to judge) | 0.333 | 0.449 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; the direct Gemma label and the distilled Codex classifier agree on what is shown here.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".