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Record W6924830742 · doi:10.15468/dl.zg6su9

Occurrence Download

2024· dataset· en· W6924830742 on OpenAlexaboutno aff

Bibliographic record

VenueGlobal Biodiversity Information Facility · 2024
Typedataset
Languageen
Field
Topic
Canadian institutionsnot available
Fundersnot available
KeywordsBiodiversityDownloadBarcodeInvertebrateHerringHerbarium

Abstract

fetched live from OpenAlex

A dataset containing 4875011 species occurrences available in GBIF matching the query: { "and" : [ "BasisOfRecord is one of (Observation, Human Observation, Material sample, Specimen, Living Specimen, Occurrence evidence)", "Continent is North America", "DatasetKey is one of (EOD – eBird Observation Dataset, iNaturalist Research-grade Observations, Ecological Genomics of a Seasonally Anoxic Fjord; Saanich Inlet, DFO Pacific: Herring Biosample Database, Pacific Multispecies Small Mesh Bottom Trawl Survey, International Barcode of Life project (iBOL), Centre for Biodiversity Genomics - Canadian Specimens, INSDC Sequences, Royal BC Museum - Herbarium (V), Royal BC Museum - Invertebrates Collection)", "Geometry POLYGON((-124.0042 48.36697,-123.72615 48.32172,-123.54174 48.28019,-123.4169 48.39712,-123.29207 48.38959,-123.2183 48.42537,-123.25518 48.49122,-123.32044 48.57577,-123.34881 48.67141,-123.32985 48.74231,-123.22754 48.72379,-123.07908 48.73702,-123.01087 48.78595,-123.15331 48.83484,-123.32183 48.92587,-123.39606 48.94959,-123.53649 48.93114,-123.61272 48.91796,-123.58865 48.86784,-123.54652 48.79124,-123.53047 48.70658,-123.50439 48.62443,-123.67912 48.56684,-123.89945 48.43108,-124.0042 48.36697))", "HasCoordinate is true", "HasGeospatialIssue is false", "IucnRedListCategory is one of (CR, EN, VU, NT, LC, DD, NE)", "OccurrenceStatus is Present", "PublishingOrg is one of (e2e717bf-551a-4917-bdc9-4fa0f342c530, 28eb1a3f-1c15-4a95-931a-4af90ecb574d, c98a8d0d-cab2-4506-8c0f-c91a5e4996b9, ab733144-7043-4e88-bd4f-fca7bf858880, b3bf3a83-1f68-4541-a03f-330d30d567f5, 296fe5cf-ae43-4212-8f77-293e807d0d5a, ada9d123-ddb4-467d-8891-806ea8d94230, cc6110c7-f75c-47c8-8931-f7dd3f324777)" ] } The dataset includes 4875011 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009899-240216155721649/datasets/export for details. Data from some individual datasets included in this download may be licensed under less restrictive terms.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.007
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesInsufficient payload (model declined to judge)
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Dataset · Consensus signal: Dataset
Teacher disagreement score0.649
Threshold uncertainty score0.926

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.007
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0020.002
Bibliometrics0.0060.009
Science and technology studies0.0010.000
Scholarly communication0.0040.004
Open science0.0030.004
Research integrity0.0020.002
Insufficient payload (model declined to judge)0.3510.428

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.234
Teacher spread0.217 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; the direct Gemma label and the distilled Codex classifier agree on what is shown here.

Study designNot applicable
Domainnot available
GenreDataset

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

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