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Record W6925612142 · doi:10.17632/nc2rfn9b49

Evolution and taxonomic revision of the “residual highbush” blueberries of Vaccinium sect. Cyanococcus (Ericaceae)

2025· dataset· en· W6925612142 on OpenAlexaboutno aff

Bibliographic record

VenueMendeley Data · 2025
Typedataset
Languageen
FieldMedicine
TopicMicrobial Natural Products and Biosynthesis
Canadian institutionsnot available
Fundersnot available
KeywordsMonophylyPolyploidVacciniumTaxonomy (biology)PloidyCladeContext (archaeology)

Abstract

fetched live from OpenAlex

The taxonomy of naturally occurring Vaccinium corymbosum has varied widely. The original monograph of V. sect. Cyanococcus treated the species narrowly as a tetraploid of the northeastern U.S. and adjacent Canada, whereas the most recent treatment of the section synonymized many species under a single polymorphic species ranging across eastern North America. Data from morphology, phylogenomics, and flow cytometry to assess ploidy have recently been used to resurrect several of the original species from the synonymy of V. corymbosum. This has left remaining a “residual highbush” blueberry group of uncertain species number and delimitation. We assessed the taxonomy of this group in the context of its origin and evolution with the same types of data and analyses used to segregate the prior species. Phylogenomic analysis yielded a monophyletic residual highbush group corroborated by several morphological characters. Neither the diploids nor the tetraploids in the clade formed monophyletic groups, but principal component and genetic structure analyses provided evidence of mostly distinct groups aligned with ploidy. The two ploidal levels have largely nonoverlapping geographic ranges, with the diploids in the southeastern U.S. and tetraploids in the northeastern U.S. and adjacent Canada, overlapping along the Atlantic Coastal Plain and East Gulf Coastal Plain. The nonmonophyly of the tetraploids, together with the prior finding of high frequencies of unreduced gametes in the residual highbush clade, suggest multiple autopolyploid origins. The lack of tetraploids throughout the entire western range of the diploids suggests that polyploid formation is localized or rare and that the two ploidy levels have largely followed separate evolutionary trajectories. We found higher genetic diversity in the tetraploid versus the diploid, suggesting that if gene flow is occurring between ploidal levels, it is not recent. Based on a synthesis of the data, we recognize two species, the diploid V. fuscatum and the tetraploid V. corymbosum, differentiated at least in part morphologically by characters that may be associated with the polyploid gigas effect. We provide a taxonomic revision, including a key, full synonymy, a discussion of character variation, nomenclatural and ecological notes, geographic distribution maps, and lists of representative specimens examined. We place four names variably recognized in recent floristic and horticultural literature in synonymy, i.e., the diploids V. atrococcum and V. caesariense under V. fuscatum, and the tetraploids V. formosum and V. marianum under V. corymbosum. We provide lectotypes for Cyanococcus holophyllus, V. atlanticum, V. caesariense, V. corymbosum, V. corymbosum var. atrocarpum, V. corymbosum var. glabrum, V. formosum, V. fuscatum, V. marianum, and V. vicinum. Vaccinium cuthbertii is placed under the synonym of V. fuscatum but warrants further investigation as to its possible taxonomic distinctness.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Dataset · Consensus signal: none
Teacher disagreement score0.005
Threshold uncertainty score0.010

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0010.001
Scholarly communication0.0020.001
Open science0.0010.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.023
GPT teacher head0.269
Teacher spread0.246 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreDataset

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

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