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Record W6929427512 · doi:10.5061/dryad.83bk3j9mj

Genotype-environment interaction and the maintenance of genetic variation: an empirical study of Lobelia inflata (Campanulaceae)

2020· dataset· en· W6929427512 on OpenAlexaff

Bibliographic record

VenueZenodo (CERN European Organization for Nuclear Research) · 2020
Typedataset
Languageen
Field
Topic
Canadian institutionsCarleton University
Fundersnot available
KeywordsNucleofectionTSG101LimitingHyporeflexiaCircumstantial evidence

Abstract

fetched live from OpenAlex

Genetic variation in natural populations often occurs at levels suggesting the action of processes such as frequency-dependent selection, heterozygote advantage, and variable selection. However, the maintenance of genetic variation in fitness-related traits remains incompletely explained. Obligately self-fertilizing populations of Lobelia inflata(Campanulaceae L.) are characterized by high levels of genetic variation, strongly implying balancing selection. L. inflataoffers an exceptional opportunity for an empirical test of genotype-environment interaction (GxE) as a variance-maintaining mechanism under fluctuating selection: L. inflatais monocarpic and reproduces only by seed, facilitating assessment of lifetime fitness; genome-wide homozygosity precludes some mechanisms of balancing selection, and microsatellites are, in effect, genotypic lineage markers. Here, we find support for the temporal GxE hypothesis using a manipulated space-for-time approach across four environments: a field environment, an outdoor experimental plot and two differing growth chamber environments. High genetic variance was confirmed: 83 field-collected individuals consisted of 45 distinct microsatellite lineages with on average 4.5 alleles per locus. Rank-order fitness, measured as lifetime fruit production in sixteen replicated multilocus genotypes, changed significantly across environments. Phenotypic differences among microsatellite lineages were detected. Although results support the GxE hypothesis in principle, evaluation of the effect size of this mechanism and fitness effects of life-history traits will require long-term study of fluctuating selection on labelled genotypes in the field.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Dataset · Consensus signal: none
Teacher disagreement score0.003
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.036
GPT teacher head0.274
Teacher spread0.238 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreDataset

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2020
Admission routes1
Has abstractyes

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Same venueZenodo (CERN European Organization for Nuclear Research)→French-language works237,207→