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Record W6930368500 · doi:10.5281/zenodo.12594498

JATOS/JATOS: JATOS v3.9.3

2024· other· en· W6930368500 on OpenAlexaff

Bibliographic record

VenueZenodo (CERN European Organization for Nuclear Research) · 2024
Typeother
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMolecular Biology Techniques and Applications
Canadian institutionsMcMaster University
Fundersnot available
KeywordsDownloadMetadataHeaderGraphical user interfaceComponent (thermodynamics)UsabilitySoftwareField (mathematics)

Abstract

fetched live from OpenAlex

If you want to update a JATOS server from version < 3.7.1 read the release information from v3.7.x first. Try out the new version on cortex.jatos.org. Changes in 3.9.3 Fix: GUI - File download for large files doesn't work on Chrome/Edge using HTTPS (#310) Changes in 3.9.2 Fix: GUI - File download for large files doesn't work on Chrome/Edge using HTTPS (#310) Fix: GUI - Waiting popup not hiding when file selector appears at the same time Fix: Missing jquery-3.5.1.min.js (#311) Fix: GUI - Order of result data if exported as 'plain text' or metadata in CSV format - order now by ascending component result IDs Fix: GUI / result pages - Export dropdown sometimes appear only after second click Changes in 3.9.1 Update of JATOS' GUI (using Bootstrap 5): Same functionality but better usability New study sidebar Sidebar hides when not needed "New Study" and "Import Study" buttons moved into sidebar Study search field for study names Study badges: shows components and if study is locked, linear flow, group study, has preview enabled New user sidebar for everything that is user related (user settings, password, API token etc.) Use minidenticons.js as a visual clue who's signed in Breadcrumbs moved into the header New alert style based on Bootstrap's Toast Better mobile support Dark/light mode Sign-in with "Keep me signed-in" slider Store last visited page and go to it after sign-in Extra Description button in study toolbar with study description opening up in a sidebar Simpler new study and new component dialogs, e.g. study assets folder name is set by default to the study UUID (but can be still changed in the properties) Docker image: switch base from eclipse-temurin:11-jre-ubi9-minimal to eclipse-temurin:11-jre-jammy (Debian based) Dependency updates: ACE, DataTables, jQuery, showdown.js Fix potential path traversal vulnerability in importing of zipped studies Previous releases: github.com/JATOS/JATOS/releases Which variant do I need? If you have Java 11 already installed (all OS): jatos.zip Not Java 11 installed: Choose according to your OS between jatos_win_java.zip jatos_mac_java.zip (if you have problems install your own Java with brew) jatos_linux_java.zip If you prefer Docker: hub.docker.com/r/jatos/jatos

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.004
metaresearch head score (Gemma)0.018
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Software · Consensus signal: Software
Teacher disagreement score0.379
Threshold uncertainty score0.885

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0040.018
Meta-epidemiology (narrow)0.0050.005
Meta-epidemiology (broad)0.0030.004
Bibliometrics0.0040.002
Science and technology studies0.0020.001
Scholarly communication0.0090.010
Open science0.0080.007
Research integrity0.0030.006
Insufficient payload (model declined to judge)0.3790.539

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.260
Teacher spread0.244 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designNot applicable
Domainnot available
GenreSoftware

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2024
Admission routes1
Has abstractyes

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