Sequences used or produced in our phylogenetic analyses of Clavariadelphus in China. in The genus Clavariadelphus (Clavariadelphaceae, Gomphales) in China
Bibliographic record
Abstract
Sequences used or produced in our phylogenetic analyses of Clavariadelphus in China. TaxonVoucherLocalityGenBank Accession No. (ITS)Clavariadelphus alpinusHKAS 57396China, YunnanMK705888*C. americanusMycoMap # 1288USA, IndianaMK575228C. amplusHKAS 76577China, GansuMK705851*C. amplusHKAS 54876China, YunnanMK705857*C. amplusHMAS 132008China, QinghaiMK705852*C. amplusHMAS 97090China, QinghaiMK705853*C. amplusHKAS 49229China, SichuanMK705854*C. amplusHKAS 49278China, SichuanMK705855*C. amplusHKAS 53797China, SichuanMK705856*C. amplusHMAS 250466China, YunnanMK705858*C. amplusHMAS 97248China, TibetMK705859*C. amplusHMAS 59867China, TibetMK705860*C. amplusHKAS 46160China, TibetMK705861*C. amplusHKAS 46120China, TibetMK705862*C. elongatusHKAS 76589China, GansuMK705842*C. elongatusHKAS 50742China, SichuanMK705843*C. elongatusHKAS 50801China, SichuanMK705844*C. elongatusHMAS 260746China, YunnanMK705845*C. elongatusHKAS 52425China, YunnanMK705846*C. elongatusLAH 31397Pakistan, Khyber PakhtunkhwaMG768847*C. elongatusSWAT 000559Pakistan, Khyber PakhtunkhwaMG768848*C. gansuensisHKAS 76487China, GansuMK705847*C. griseoclavusBJTC FM964China, ShanxiMT302370C. griseoclavusBJTC FM965China, ShanxiMT302371C. himalayensisHKAS 50684China, YunnanMK705863*C. himalayensisHKAS 58811China, YunnanMK705864*C. khinganensisMHHNU 7789China, Inner MongoliaMK705865*C. khinganensisMHKMU H.Y. Huang 368China, JilinMT447468*C. ligulaHMAS 51688China, HeilongjiangMK705848*C. ligulaHMAS 35954China, HeilongjiangMK705849*C. ligulaHMAS 41146Czech, -MK705850*C. mucronatusOSC 1064138USA, OregonEU526000C. occidentalisOSC 104664USA, the Pacific NorthwestEU669308C. occidentalisOSC 112861USA, the Pacific NorthwestEU669202C. occidentalisOSC 114250USA, the Pacific NorthwestEU834202C. occidentalisOSC 114281USA, the Pacific NorthwestEU846242C. occidentalisH21536Tunisia, Aïn DrahamKU973835C. pistillarisNAMA 2017-123USA, WisconsinMH979250C. pistillarisAMB 18611Italy, AquilaMT452507C. pakistanicusMH 129901Pakistan, Khyber PakhtunkhwaHQ379937C. pakistanicusSR1742India, -MT012805C. sachalinensisMHHNU 7816China, Inner MongoliaMK705866*C. sachalinensisp061iUSA, the Pacific NorthwestEU624408C. sachalinensisp059iUSA, the Pacific NorthwestEU624410C. sachalinensisp058iUSA, the Pacific NorthwestEU624411C. sachalinensisOSC 96213USA, the Pacific NorthwestEU834196Clavariadelphus sp.src121USA, CaliforniaDQ974709Clavariadelphus sp.OSC 105674USA, the Pacific NorthwestEU669206Clavariadelphus sp.HC-PNNT-268Mexico, Mexico StateKT874982Clavariadelphus sp.ECM54China, ZhejiangJQ991679Clavariadelphus sp.MushroomObserver.org/254047Mexico, QueteraroMH304404Clavariadelphus sp.Montri-108Switzerland, MontricherMK028378C. subfastigiatusOSC 119587USA, the Pacific NorthwestEU669207C. subfastigiatusMICH 73554USA, Clackamas CountyJX275756C. truncatusMA-Fungi 48062Spain, -AJ292288C. truncatusOUC99108Canada, British ColumbiaDQ097871C. truncatusSIM278Canada, British ColumbiaHQ650728C. truncatusAMB 18612Italy, BellunoMT452508C. unicolorMushroom Observer #112193USA, IndianaMN906166C. yunnanensisHKAS 49398China, SichuanMK705867*C. yunnanensisHKAS 31136China, SichuanMK705868*C. yunnanensisHKAS 54849China, YunnanMK705869*C. yunnanensisHKAS 63558China, YunnanMK705870*C. yunnanensisHKAS 57731China, YunnanMK705871*C. yunnanensisHKAS 58789China, YunnanMK705872*C. yunnanensisHKAS 55244China, YunnanMK705873*C. yunnanensisHMAS 250510China, YunnanMK705874*C. yunnanensisHMAS 250471China, YunnanMK705875*C. yunnanensisHKAS 62644China, YunnanMK705876*C. yunnanensisHKAS 61417China, YunnanMK705877*C. yunnanensisHKAS 43816China, YunnanMK705878*C. yunnanensisHKAS 30752China, YunnanMK705879*C. yunnanensisHKAS 30083China, YunnanMK705880*C. yunnanensisHKAS 20068China, YunnanMK705881*C. yunnanensisHKAS 20067China, YunnanMK705882*C. yunnanensisHKAS 17788China, YunnanMK705883*C. yunnanensisHKAS 15063China, YunnanMK705884*C. yunnanensisHKAS 57659China, YunnanMK705885*C. yunnanensisHKAS 77226China, YunnanMK705886*C. yunnanensisHKAS 77288China, YunnanMK705887*Lentaria byssisedaTENN 61159USA, TennesseeFJ596788Kavinia himantiaCFMR:DLL2011-079USA, WisconsinKJ140598K. alboviridisCFMR:DLL2011-131USA, WisconsinKJ140634 * indicates sequences generated in this study, fontbold indicates type material for the new species.
Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.
How this classification was reachedexpand
Full frame distilled prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.
Codex and Gemma teacher scores by category
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.001 | 0.001 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.001 | 0.000 |
| Bibliometrics | 0.001 | 0.002 |
| Science and technology studies | 0.000 | 0.000 |
| Scholarly communication | 0.000 | 0.000 |
| Open science | 0.002 | 0.001 |
| Research integrity | 0.000 | 0.001 |
| Insufficient payload (model declined to judge) | 0.001 | 0.000 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one teacher head, not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".