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Record W6930661844 · doi:10.5281/zenodo.14285749

Shared Software Environments for Heliophysics.

2024· report· en· W6930661844 on OpenAlexaff

Bibliographic record

VenueZenodo (CERN European Organization for Nuclear Research) · 2024
Typereport
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicATP Synthase and ATPases Research
Canadian institutionsTrillium Therapeutics (Canada)University of British Columbia
Fundersnot available
KeywordsSoftware constructionSocial software engineeringSoftware developmentResource-oriented architectureSoftware analyticsPersonal software processSoftware frameworkSoftwarePackage development process

Abstract

fetched live from OpenAlex

Making software work across platforms is currently a challenging engineering task but modern approaches to software engineering and development are making it attainable. In the past decades shared software environments have come into a mature state. It is possible to create and use these shared software environments on different platforms. This greatly facilitates sharing and using software between computers. The premise of these shared software environments is that they ‘just work’, regardless of the platform, and decrease user time spent resolving dependencies and related software installation challenges. Furthermore, we believe that open science, which has the goal of creating transparent and reproducible results, will require such solutions since much of our research today relies on creating and/or repurposing existing software to do science. In this paper we describe the efforts of the IHDEA Science Platforms group to engineer a small set of basic shared environments for doing heliophysics research using Python software. These software environments include a range of implementations ranging from virtual environments to containerized environments as well as container-backed platforms, like JupyterLab, which may be hosted remotely in the cloud or institutional compute environments. We present use cases, our work to identify key software in use by the community, our analysis to understand the types of shared software environments that would be of the most use to the community

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.007
metaresearch head score (Gemma)0.016
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Other · Consensus signal: none
Teacher disagreement score0.040
Threshold uncertainty score0.135

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0070.016
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.002
Bibliometrics0.0010.002
Science and technology studies0.0020.002
Scholarly communication0.0050.010
Open science0.0030.013
Research integrity0.0020.004
Insufficient payload (model declined to judge)0.0400.021

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.044
GPT teacher head0.292
Teacher spread0.248 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

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